| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0852 |
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| Symbol | |
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| ID | 3752617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | - |
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| Start bp | 957807 |
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| End bp | 959294 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637765701 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_371610 |
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| Protein GI | 78061702 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00942997 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAACT ACCTCGAACC CGTCCCGCGC AAGCTTCGCG TCAATGCGCT CGCCACGCTG
CTGCTGTCGC TCGCCGCCAC GCCCGCGTTC GCGCAAGCAT CGTCGTCTGC CGCAACCGAA
CCGGCGGCCG GCGCCAGCGA CGCCGCCGCT CCCGCACAAC AGGCCGCCGA TGCTGCCGCG
CCCGCCCCCA CCGGCTTCTG GGAGCGTTCG AACCTGCTCG GCAACATGGG CGGCCTGCGC
GACGTGCTCG GCGATCACGG CATCACACTG AGCCTGCAGG AAACCAGCGA GTACCTGTAC
AACACGTCGG GCGGCACGAA TCGCGGCGGC GCGTACCAGG GGCTCACGCA ATTCGGTTTC
AACGTCGACA CGGGCAAGGC GGTCGGCCTG CCGGGCGGCA CGTTCAACGT GTCGGCGCTG
CAGATTCACG GCACCAACCT CACGCAGCGC TATCTGCAGA CGCTGCAGAC CGCGACCGGC
ATCGAAGCGA ATTCGACCAC GCGCCTGTGG GAACTCTGGT ACCAGCAGTC GCTGCTCGAC
GGCAAGGTCG ACGTGAAGGT CGGCCAGCAG AGTGTCGACC AGGAATTCAT GGTGAGCCAG
AACGCGGCGA CGTTCATGAA CGCGACGTTC GGCTGGCCCG TGCTGCCGTC GACCGACCTG
CCGGCCGGCG GCCCCGCGTA TCCGCTGTCG TCGCTCGGCG TGCGGCTGCG CGTGAAGCCG
TCCGATGCAT GGACCGCGAT GATCGGCGTG TTCGACGGCA ACCCGGCCGG CCGCAGCGAC
GGCGATGCGC AAGTGCTGAA CGCGCACGGC ACCAACTTCA ACCTGCGGAG CGGCGCGTTC
GTGATCGGCG AAGTGCAATA CGCGCTGAAC GCGCCGCCCG CCGATCCGAA GGCACCGCAG
CCGGCCGGCC TGCCGGGCAC GTACAAGCTC GGCTTCTGGT ATCAGACGCA GCATGCGAAC
GACCCGCGCT ACGGCACCGA CGGTCTGTCG CTCGCGAATC CGGAGAGCAA CGGCATTGCC
GCCACCCATC GCGGCAACTA CTCGTTCTAC GCGGTCGCGG ACCAGATGGT ATGGCGGCCG
TCGGCCGACA GCCCGCGCTC GGTCAACGTG TTCGCGCGCG TGATGGGTGC GCCGGGCGAC
CGCAATACCG TCGATTTCGC CGCCAACGCA GGCGTGACGC TGAAAGCGCC GTTCAAGGGT
CGCGACAACG ACGTCGCGGG CATCGCGGTC GGCTACGCGA AGATCGGCTC GCATGCGCGC
GGCCTCGACG GCGACACCGG CGTCTACACG ACGCCCGGCT ATCCGGTGCG CCGTGCGGAA
ACGGTCGTCG AGGCGACCTA CCAGTACCAG GTCACGCCGT GGTGGCAGAT GCAGGCCGAC
CTGCAGCACT TCTTCCGTCC GGGCGGCGGC ATCCCGAACC CGAACGCAGC CGGTGCACGC
ATCGGCGACG AAACGGTGGT CGGCGTGCGC ACGACGATCA CGTTCTAA
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| Protein sequence | MKNYLEPVPR KLRVNALATL LLSLAATPAF AQASSSAATE PAAGASDAAA PAQQAADAAA
PAPTGFWERS NLLGNMGGLR DVLGDHGITL SLQETSEYLY NTSGGTNRGG AYQGLTQFGF
NVDTGKAVGL PGGTFNVSAL QIHGTNLTQR YLQTLQTATG IEANSTTRLW ELWYQQSLLD
GKVDVKVGQQ SVDQEFMVSQ NAATFMNATF GWPVLPSTDL PAGGPAYPLS SLGVRLRVKP
SDAWTAMIGV FDGNPAGRSD GDAQVLNAHG TNFNLRSGAF VIGEVQYALN APPADPKAPQ
PAGLPGTYKL GFWYQTQHAN DPRYGTDGLS LANPESNGIA ATHRGNYSFY AVADQMVWRP
SADSPRSVNV FARVMGAPGD RNTVDFAANA GVTLKAPFKG RDNDVAGIAV GYAKIGSHAR
GLDGDTGVYT TPGYPVRRAE TVVEATYQYQ VTPWWQMQAD LQHFFRPGGG IPNPNAAGAR
IGDETVVGVR TTITF
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