| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0816 |
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| Symbol | |
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| ID | 3752581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | - |
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| Start bp | 924406 |
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| End bp | 925920 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637765665 |
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| Product | spermidine synthase |
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| Protein accession | YP_371574 |
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| Protein GI | 78061666 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.072046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.468217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCATA GGCGCGCGCT CGTCCTGTCG ATTCTCGTGC TCGCGTCGTG CGGGCTCGGC
TACGAACTGA TCAGCAGCGC GCTGTCCAGC TACCTGCTCG GCGATTCGAT CCTGCAGTTC
TCGTCGGTGA TCGGCTGCTA CCTGTTTGCG ATGGGGATCG GCTCGTGGCT CGCGAAGTTC
GTCGAGGACG ACGACGTGCT CGACCGCTTC GTCGACATCG AGTTGCTCGT CGGCCTGCTC
GGCGGCGTGT CGGCCGCGCT GCTGTTCGCG GTGTTCGCGT GGCTCGCCGC GCCGTTCCGC
GCGGCGCTCT ATGCGCTCGT GCTGGCGCTC GGCATGCTGA TCGGGATGGA GATCCCGCTC
GTGATGCGCG CGTTCCAGCA ACGGCGCCAG GCGTTCCGCC ATACCGTCAG CGAAGTGCTG
ACCTTCGACT ATCTCGGCTC GCTCGCCGTG TCGCTGATCT TCCCGCTCGT GCTCGCACCG
CGTCTCGGCC TGCTGCGCAC CAGCTTCCTG TTCGGGCTCC TGAACGCGTT CGTCGCGCTC
TGGACGACAC ACCTGTTCCG CGACGAGATC CGCAACGTGC GCGGCAAGCT GATGCGCGCG
TCGCTCGTGA TCGGGCTGCT CGTCGCCGGC TTCGCGCTGT CGGACCGCAT CACGCACTGG
GCCGAACACG GCGTGTACGG CGACGAGACG ATCTATTCGG AAACGACGCC GTACCAGCGG
ATCGTGCTCA CGCAGTGGCA CGACGACATG CGCCTGTACC TGAACGGCAA CCTGCAGTTC
TCGTCGCGCG ACGAGCATCG CTATCACGAG GCGCTGATCC ACCCGACGAT CGACGCGCTG
CCGTGGGCGA AGCGCGTGCT CGTGCTCGGC GGCGGCGACG GCCTCGCGGT GCGCGAACTG
CTGAAGCACC GCAACCTCGA ACAGATCACG CTCGTCGATC TCGATCCCGC GATGACGAAG
CTGTTCTCGA CCTCCGCGCC GCTCGTCAAG CTGAACCAGG GCTCGCTGAA AGACCCGCGC
GTGCACGTGA TCAACGACGA CGCGGTGCGC TGGCTCGAAT CGAATGCCGA CGTGTACGAC
GCAATCGTCG TCGACTTCCC CGACCCGACC AACTTCGGGC TCGGCCGGCT GTATTCGGTG
CCCGTGTTCC GGCTGCTTGC GCGCCACCTG TCGGAGAACG GCTACGCGGT GATCCAGTCG
ACGTCGCCGT ATTTCGCGCC GCACGCGTAC TGGACCATCA TCGCGACGCT GCACGAAGCC
GGGCTCAACA CCTGGCCGTA CCACTGCTAC GTACCGTCGT TCGGCGACTG GGGCTTCGTG
ATCGCCGGCA AGCGCCGCGA CTTCACGGTG CCGACGCACT ACTCGGTGCC CACGCGCTGG
CTCGATGCGC AAACGGCCGC CGAGATGTTC CACTTCCCGG CCGACATGCC GGCGCTGCCG
ATGTCGCCGA ACGAACTCAA CGACCAGCCG CTCGTGCGCC GCTTCGACGA CGACTGGAAA
CACGTGTTGC GCTGA
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| Protein sequence | MLHRRALVLS ILVLASCGLG YELISSALSS YLLGDSILQF SSVIGCYLFA MGIGSWLAKF
VEDDDVLDRF VDIELLVGLL GGVSAALLFA VFAWLAAPFR AALYALVLAL GMLIGMEIPL
VMRAFQQRRQ AFRHTVSEVL TFDYLGSLAV SLIFPLVLAP RLGLLRTSFL FGLLNAFVAL
WTTHLFRDEI RNVRGKLMRA SLVIGLLVAG FALSDRITHW AEHGVYGDET IYSETTPYQR
IVLTQWHDDM RLYLNGNLQF SSRDEHRYHE ALIHPTIDAL PWAKRVLVLG GGDGLAVREL
LKHRNLEQIT LVDLDPAMTK LFSTSAPLVK LNQGSLKDPR VHVINDDAVR WLESNADVYD
AIVVDFPDPT NFGLGRLYSV PVFRLLARHL SENGYAVIQS TSPYFAPHAY WTIIATLHEA
GLNTWPYHCY VPSFGDWGFV IAGKRRDFTV PTHYSVPTRW LDAQTAAEMF HFPADMPALP
MSPNELNDQP LVRRFDDDWK HVLR
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