| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0675 |
|---|
| Symbol | |
|---|
| ID | 3752439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 763385 |
|---|
| End bp | 765106 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637765523 |
|---|
| Product | ABC efflux pump, fused inner membrane and ATPase subunits |
|---|
| Protein accession | YP_371433 |
|---|
| Protein GI | 78061525 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.018058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.847795 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGGC CATTGCTTTC GATGTTGCGG CCGTTCGCGG TGCCGCTCGT GGCGGCGGTC
GTGCTGCAGG CGCTGGCGGG TGTCGCATCG CTCGTGCCGT GGCTCGCGCT CGGCCGTGTC
GCCGACGCGT GGCGCGCGAC GGCGCAGCTC GACGCGACGG CGCGCGGCTG GCTCGTCGCG
GCCGTGGTGG CCGGCGTGTG CTGGCTGGGC GGCCAGACGG TCGCGCTGCA CCTGACGCAC
CGGGTCGACG CCGATCTCGC CGATCGCTTG CGCAGGCGCC TCGCCGATCA TCTGCAACGC
TTGCCGCTCG GCTGGTTCGC GCGTGCGGGC AGCGATCGCG TCGCGCGTCA CGTCGACCAG
GACGTGCGTG CGCTGCACCA GCTCGTCGCG CACGCGCCGG CCGATGTCAC GCAGTTGATC
GTCGTGCCGT GCGCGGCGCT CGCGTGCCTG CTTTACCTGA ATCCCGTGCT GCTCACGTTC
GCGCTGGTAC CGCTCGTCGC GGGCGCCGCA CTGTTTCGCT GGATGCGTTC GGCGCGGTTC
GCGCCGGCCG TCACGTCGCG CAACGGCGCG CTTGAACAGT TGATGGGCGA CTACGCGCAG
CTCGCGCAGA ACCCGGCGCT CGTGCGGCAG TACCCGGGCG CCGGTATCGA GGCGGCCGCG
CTGGCGTCGA CCGGGCGCTT CGAGCAGGCG TTTTCGGCGT GGGTCGGCCG CGTCGGCGGG
CCCGGTGCGT GCACGCAGGT GCTGCTCGGC ACGCCCTTCC TGCTCGCGTG GGTCGTGTTC
GGCGCGATGT GGCTGACGGC GGGCCGCTTG CCCGTCGGCG AACTCTGCGC GTTTGCACTG
CTGATCTGGG CAGTAGCGGC GCCGGTGCGT GCACTCGGCC ACGGTGCCGA CGCATTGCGC
GAAGCGCGCG CGGCGGCCGC ACGCCTCGAT GCGTTGCTCG CGCAGCCAGT TCTGCCCGGG
CCAGCCGATC GCGCTGCACA GGTACCGCGC GATGCGTCGA TCGAACTGCG CGGCGTGAGT
GTCGACATCG ACGGCACACC GATCCTGCGC GACATCGATG CGACGATTTC GGCCGGCACG
ACCACCGCGA TCGTCGGGCC GTCGGGTGCG GGCAAGAGCA CGCTGCTGAT GCTGCTCGCG
CGCTTCATGG ATCCGGACCA CGGCACGGTG CGGCTCGGCG GCGCCGATCT GCGGCTGCTC
GCGTCGGATA CGCGGCGCGA ACAGGTGGCG ATGGTGTTCC AGCAGGCCGC CGCGCTCGAC
GTGTCGATTG CCGCGAACAT CGCGCTTTAC CGGCCGGACG CCGATCGCGA TGCGATTCGC
GCAGCCGCAC GCGCGGCCTG CCTCGACGAA CGCATCGACG CGTTGCCGGG CGGCTACGAC
TGCATATGCG GTCGTGACGT GCGGCTGTCC GGCGGCGAAC TGCAGCGTTT GGCGATTGCA
CGTGCGCTGC TGTCGCCGGC GCCGCTGCTG CTGCTCGACG AACCGGCTTC GGCGCTCGAT
CCGCAAACCG GGCGCGCATT GCGCAATGCG CTGCGCGGTG ATGCACGCAC GCGCGTGATT
GTCAGTCATG ATCTCGATGC AATCCGGCAT GCGGACCAGA TTCTCGTGAT GGATCGCGGC
CGCATCGTCG AGCGTGGCAC GCATGCGGTG CTGCTGGCCG CGCGCGGGCT GTATGCGCGG
CTATGGAGCG AACGCGGTGC GGCAGACGGG GAGGCCGCAT GA
|
|---|
| Protein sequence | MKGPLLSMLR PFAVPLVAAV VLQALAGVAS LVPWLALGRV ADAWRATAQL DATARGWLVA
AVVAGVCWLG GQTVALHLTH RVDADLADRL RRRLADHLQR LPLGWFARAG SDRVARHVDQ
DVRALHQLVA HAPADVTQLI VVPCAALACL LYLNPVLLTF ALVPLVAGAA LFRWMRSARF
APAVTSRNGA LEQLMGDYAQ LAQNPALVRQ YPGAGIEAAA LASTGRFEQA FSAWVGRVGG
PGACTQVLLG TPFLLAWVVF GAMWLTAGRL PVGELCAFAL LIWAVAAPVR ALGHGADALR
EARAAAARLD ALLAQPVLPG PADRAAQVPR DASIELRGVS VDIDGTPILR DIDATISAGT
TTAIVGPSGA GKSTLLMLLA RFMDPDHGTV RLGGADLRLL ASDTRREQVA MVFQQAAALD
VSIAANIALY RPDADRDAIR AAARAACLDE RIDALPGGYD CICGRDVRLS GGELQRLAIA
RALLSPAPLL LLDEPASALD PQTGRALRNA LRGDARTRVI VSHDLDAIRH ADQILVMDRG
RIVERGTHAV LLAARGLYAR LWSERGAADG EAA
|
|---|
| |