Gene Bcep18194_B0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B0539 
Symbol 
ID3752303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp601949 
End bp603370 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content70% 
IMG OID637765387 
Productmajor facilitator transporter 
Protein accessionYP_371297 
Protein GI78061389 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCG CCACCGCTCC CGCCTCCGCC GCCGCCCGGC TCGAACGCCT GCCGTTCTCC 
GGCTATCACA AGCGGATCTT CTTCATCATC GCGATCGCGT TCTTCTTCGA CTCGGTCGAC
CTCGGCACGA TGACGTTCGT ACTCGGCTCG ATCCGCAAGG AGTTCGGCCT GTCGACCGCG
GCCGCCGGCC TCGTCGCGAG CGCGAGCTTC TTCGGAATGG TGCTCGGCGC GGCCGTCGCC
GGCCTGCTCG CCGACCGCTT CGGCCGCCGG CCCGTGTTCC AGTGGAGCAT GGTGCTGTGG
GGCGCCGCCT CCTACCTGTG TTCGACCGCG CAGAGCGTCG ACGCGCTGAT CGTCTACCGC
GTGCTGCTCG GGATCGGGAT GGGGATGGAA TTCCCGGTCG CGCAGACCTT GCTGTCCGAA
TTCGTGCCGA CCGAGAAGCG CGGCCGCCTG ATCGCGCTGA TGGACGGCTT CTGGCCGCTC
GGCTTCATCA CGGCCGGTAT CGTCGCGTAC TTCGTGCTGC CGCAGTTCGG CTGGCGCACC
GTGTTCGCGC TGCTCGCGAT TCCCGCCGTG TTCGTGCTCG TCGTGCGCCG CATCGTGCCG
GAATCGCCGC GCTGGCTCGA GCATGCGGGC CGGCACGCGG AAGCCGACAC GGTGATGCAC
ACGATCGAGG CGAAGGTAAT GCGCTCGGCC GGCGTCACCA CGCTGCCGGC GCCGTCGCGG
CTGGCCGAGC CGGTCGTCGC CCGCGGGCGC GGCGCGCTGC GCGAGATCTG GAGCGGCGCG
TACCGCCGCC GCACGGTGAT GGTGTGGCTG CTGTGGTTCT TCGCGCTGCT CGGCTTCTAC
GGCCTCACGT CGTGGCTCGG CGCGCTGCTG CAGCAGGCCG GCTTCGAAGT CACGAAATCG
GTGTTCTACA CGGTGCTGAT CTCGCTCGGC GGCGTGCCGG GCTTCCTGTG CGCCGCGTGG
CTCGTCGAAC GCTGGGGGCG CAAGCCGACC TGCATCGCGT CGCTGATCGG CGGCGGCGTG
ATGGCGTTCG CCTACGGCCA GAGCGCGCTG TACGGCGGCA GCATGGCGCT GCTGATCGGT
ACCGGCCTCG CGATGCAGTT CTTCCTGTTC GGGATGTGGG CCGCGCTGTA CACGTACACG
CCGGAGCTGT ACGGCACCGG CGCGCGCGCG ACGGGCTCGG GCTTTGCATC GGCAATCGGG
CGCGTCGGCT CGCTGATCGG GCCTTACGTG GTCGGCGTCG TGCTGCCCGT GTTCGGCCAG
GGCGGCGTGT TCACGCTCGG GGCGTTGTCG TTCGTCGCGG CCGCAGTCGC CGTGTGGACG
CTCGGGATCG AGACGAAGGG CCTCGCGCTG GAACAGCTCG CGGCGGGCGA TGAAGCGGGT
GGCGGTGGCC GTTACGCGGC TGCGGCGGAC AAGGTGTCCT GA
 
Protein sequence
MPAATAPASA AARLERLPFS GYHKRIFFII AIAFFFDSVD LGTMTFVLGS IRKEFGLSTA 
AAGLVASASF FGMVLGAAVA GLLADRFGRR PVFQWSMVLW GAASYLCSTA QSVDALIVYR
VLLGIGMGME FPVAQTLLSE FVPTEKRGRL IALMDGFWPL GFITAGIVAY FVLPQFGWRT
VFALLAIPAV FVLVVRRIVP ESPRWLEHAG RHAEADTVMH TIEAKVMRSA GVTTLPAPSR
LAEPVVARGR GALREIWSGA YRRRTVMVWL LWFFALLGFY GLTSWLGALL QQAGFEVTKS
VFYTVLISLG GVPGFLCAAW LVERWGRKPT CIASLIGGGV MAFAYGQSAL YGGSMALLIG
TGLAMQFFLF GMWAALYTYT PELYGTGARA TGSGFASAIG RVGSLIGPYV VGVVLPVFGQ
GGVFTLGALS FVAAAVAVWT LGIETKGLAL EQLAAGDEAG GGGRYAAAAD KVS