| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0530 |
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| Symbol | |
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| ID | 3752294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | + |
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| Start bp | 592312 |
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| End bp | 594024 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637765378 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_371288 |
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| Protein GI | 78061380 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.830173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCGA TCAACTGCAT GCATGCGATG AAGAAACCAC AGGGAATCGA CGCCGTGCGT
CGCGACTACG ACTACGTGAT CGTCGGCGCA GGATCGGCCG GCTGCGTGCT GGCCAACCGG
CTCGGGGAAG ATCCGGGCGT GCGGGTACTG CTGCTCGAGG CCGGTCCGAC GAATCGGCAC
TGGTCGATCG ACATGCCTTC CGCGATGGGT ATCGTGGTGG GCGGCAACCG CTTCAACTGG
CAGTATCAAT CGGAGCCCGA ACCGTTCCTG AACCGGCGGC GCATCGCGAC GCCGCGCGGG
CGCGTGCTGG GCGGATCGTC GTCGATCAAC GGGATGGTCT ATATCCGCGG TCACGCACGC
GACTATGACG GCTGGTCCGG GCAGGGCTGC ACCGGCTGGA GCTATCGCGA GGTGTTGCCG
TATTTCATCC GCGCCGAGCG GCACGAGCTC GGTGCGGATC CCTACCACGG CGACAGCGGC
CATCTGCGCG TCACGGCGGG CCGGACCGAC ACGCCCCTCG CCAGCGCGTT CATCGCGTCC
GGTGTCGATG CGGGCTATGC GCACACCGAC GACGTGAACG GCTATCGCCA GGAAGGCTTC
GGCCGCGTCG ACCGCACGAC GTGGAGCGGG TCGCGCTGGA GTACCGCGCG CGGCTATCTC
GCGGAGGCGC TCGGGCGCGG CAACGTCACG GTCGTGACCG GCGCGCTCGT GCTGCGCGTG
CTGTTCGACG GCAGGCGCGC GACCGGCATC GAGTACACGT GCGACGGCGA GACGCGGCAG
GTTCGCGCGA GTGCCGAAGT GCTGCTGTGC GGTGGCGCGA TCAATACGCC GCAGTTGCTG
CTGCTGTCCG GTATCGGGCC GGCGAACGAG CTGGAAGGCT TGGGCGTGCG TGCGCGGCAC
GACCTGCCGG GCGTCGGGCG CCGGCTGTCC GATCATCCGG ATACGGTGGT GCAGTATCTG
TGCCGCAAAC CCGTCTCGAT CTACCCGTGG ACGGTCGCCC CGCGCAAATG GTGGACCGGC
GCGAAGTGGT TCGCGAACCG CGACGGGATT GCCGCGAGCA ACCATTTCGA GGCGGGGGCG
TTCATCCGCT CGCGCGCCGG CGTCGAGCAT CCGGACCTGC AACTGACCTT CATGCCGCTC
GCCGTGCAGC CGGGCAGCGT CGAGAGCGTG CGCGCACACG CGTTCCAGGT GCACATCGAC
CTGATGCGCC CGACGAGCCT CGGCGCGGTG ACGCTGGCGT CGGGCGACGC GCGCATCCCG
CCGCGGATCC TGTTCAACTA CCTGAAGACG GAGCGCGATC GGGCCGACAT GCGCGCGGGC
GTGCGGCTCG TCAGGGAGAT CCTCGCGCAG CCGTCGTTCC GCGAGCTGTG CGGCGACGAA
CTGTCGCCGG GCGCGGGCAA GACCGATGAC GCCGCGCTCG ATGCGTGGGC GCGCGACATC
ACCGAAACGG GCTATCACGC GGCGGGCACC TGCAAGATGG GCCCGGCGGA CGATCCGGAG
GCAGTGGTCG GCCCCGACCT GCGCGTGCAT GGCATCGAAC GGTTGCGCGT GATCGACGCG
TCGGTGATGC CGACGATCGT CAGCGGCAAC ACCAACGCGC CGACCGTGAT GATCGGCGAG
AAAGGCAGCG ATCTCGTGCT GGGGCGCGCG CCGCTGCCGC CGTCGGCGGC GCCGGTCTGG
GCGCAGCCCG ACTGGCGCAC CTGCCAGCGG TGA
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| Protein sequence | MISINCMHAM KKPQGIDAVR RDYDYVIVGA GSAGCVLANR LGEDPGVRVL LLEAGPTNRH
WSIDMPSAMG IVVGGNRFNW QYQSEPEPFL NRRRIATPRG RVLGGSSSIN GMVYIRGHAR
DYDGWSGQGC TGWSYREVLP YFIRAERHEL GADPYHGDSG HLRVTAGRTD TPLASAFIAS
GVDAGYAHTD DVNGYRQEGF GRVDRTTWSG SRWSTARGYL AEALGRGNVT VVTGALVLRV
LFDGRRATGI EYTCDGETRQ VRASAEVLLC GGAINTPQLL LLSGIGPANE LEGLGVRARH
DLPGVGRRLS DHPDTVVQYL CRKPVSIYPW TVAPRKWWTG AKWFANRDGI AASNHFEAGA
FIRSRAGVEH PDLQLTFMPL AVQPGSVESV RAHAFQVHID LMRPTSLGAV TLASGDARIP
PRILFNYLKT ERDRADMRAG VRLVREILAQ PSFRELCGDE LSPGAGKTDD AALDAWARDI
TETGYHAAGT CKMGPADDPE AVVGPDLRVH GIERLRVIDA SVMPTIVSGN TNAPTVMIGE
KGSDLVLGRA PLPPSAAPVW AQPDWRTCQR
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