| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0477 |
|---|
| Symbol | |
|---|
| ID | 3752241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 531161 |
|---|
| End bp | 532462 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637765325 |
|---|
| Product | Type III effector Hrp-dependent outer proteins |
|---|
| Protein accession | YP_371235 |
|---|
| Protein GI | 78061327 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.626893 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTT CCGCTTCCCG TCCCCTGCTC GGCTGCATCG CCGACGATTT CACCGGCGCG
ACCGATCTCG CGAACATGCT CGTGAAGAGC GGCATGCGCA CCGTGCAGAC GATCGGCGTG
CCCGCCGACG GCACTGCAGC TGATGCCACG CTCGACGCCG ATGCGATCGT CGTCGCGCTG
AAGTCGCGCA CGATCCCTGC GGCCGACGCC GTCGCGCAAT CGCTCGCCGC CTACGAATGG
CTGCGCGCGC AAGGCTGCCG GCAGTTCTTC TTCAAGTACT GCTCGACATT CGATTCGACC
GATGCGGGCA ACATCGGGCC CGTCGCCGAT GCGCTGCTCG ATGCAGCCGG CGGCGGCTTC
ACGATCGCAT GCCCGGCGTT CCCCGAGAAC GGCCGCACGA TCTATCGCGG CCACCTGTTC
GTCGGCGACG TGCTGCTGAA CGAATCGGGG ATGGAGAACC ATCCGCTCAC GCCGATGAAG
GATGCGAACC TCGTGCGCGT GCTGCAGCGG CAAACGAAGT CGCCGGTCGG CCTGATCCGC
TACGACACGA TCGCGCTGGG CGCGGCCGCC GTGCGCGCGC GGATCGAACA ATTGCGCGCG
GAAGGCGCGC GCTTCGCGAT CGCCGACGCG CTGTCGGACC GCGACCTCTA CGTACTCGGC
GAAGCGTGCG CGCGCTTGCC GCTCGTCACC GGCGGCTCGG GCATCGCGCT CGGCCTGCCC
GCGAATTTCC GCCGCGCGGA GCAACTGCCC GAGCGCGACA ACGCGGCGTC GCTGCCGCGC
ATCGACGGCC TGTCGGCCGT GCTCGCCGGC AGCGCGTCGA AGGCCACCAA TGCCCAGGTC
GCCGCATGGC GCACCACGCG GCCGAGCTTC CGCATCGATC CGCTCGCGGC ATCGCGCGGC
GAACCCGTCG TCGACCAGGC ACTCGCGTTC GCGCGCACGC ACCTGCCGCA GCCCGTGCTG
ATCTATGCGA CCGCGACACC CGACGAAGTG AAGGCCGTGC AGCAGGCACT CGGTGTCGAC
GCGGCCGGCC ATCTCGTCGA AGCCACGCTC GCGGCGATCG CACGCGGCCT GCGTGATCTC
GGCGTGCGCA AGTTCGTCGT CGCCGGCGGC GAAACGTCGG GTGCGGTCGT GCAGGCGCTC
GACGTGAAGT CGCTGCAGAT CGGCGCGCAG ATCGATCCGG GCGTGCCGGC AACGGCCACC
ATCGACGCGC AGCCGCTCGG CCTCGCGCTG AAGTCCGGCA ACTTCGGCAC CACGGACTTT
TTCGACAAGG CGCTGCGCGC GCTGGACGGA GCCGCACGAT GA
|
|---|
| Protein sequence | MTASASRPLL GCIADDFTGA TDLANMLVKS GMRTVQTIGV PADGTAADAT LDADAIVVAL
KSRTIPAADA VAQSLAAYEW LRAQGCRQFF FKYCSTFDST DAGNIGPVAD ALLDAAGGGF
TIACPAFPEN GRTIYRGHLF VGDVLLNESG MENHPLTPMK DANLVRVLQR QTKSPVGLIR
YDTIALGAAA VRARIEQLRA EGARFAIADA LSDRDLYVLG EACARLPLVT GGSGIALGLP
ANFRRAEQLP ERDNAASLPR IDGLSAVLAG SASKATNAQV AAWRTTRPSF RIDPLAASRG
EPVVDQALAF ARTHLPQPVL IYATATPDEV KAVQQALGVD AAGHLVEATL AAIARGLRDL
GVRKFVVAGG ETSGAVVQAL DVKSLQIGAQ IDPGVPATAT IDAQPLGLAL KSGNFGTTDF
FDKALRALDG AAR
|
|---|
| |