| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0453 |
|---|
| Symbol | |
|---|
| ID | 3752217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 506725 |
|---|
| End bp | 510126 |
|---|
| Gene Length | 3402 bp |
|---|
| Protein Length | 1133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637765301 |
|---|
| Product | membrane protein-like |
|---|
| Protein accession | YP_371211 |
|---|
| Protein GI | 78061303 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5373] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.201937 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0526268 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGGG CTTTTACCGC AATCGGCTTC ATCGTGGGCG GGATTGCCGC ATTGATCGGG
GATTTCTCCG CCATCACCGG CGCAGTGCTC GGCGCCGCGA TCGGGTTCTG CCTCGACAAC
ACGCTGCAAC AGCGCAAGCG CAAGGCCAAA GGCGCGACAC CCGCCCCGTT CGCGATGCAG
GCGCCGCCCG CCCAGCCGCC GGTTCCGCTG GCCGAGCGCG TCGCGCGCCT CGAAGCGACC
GTCGAAACGC TGACGCGCGA AATCGCATCG CTGCGTGGCC AGCTGGCCGG CACGAAGGCC
GGCACGGCCA CGACTGACGC GACCGTGCAC ACGCCCACCG GTACTGCCTC TGCCACCCCG
TCCGCACCCG TCCCGCCTTC GGTCGCCCTG CCGCCGCGCG CGCCTGCCCA GCCGGCCGCC
GCACGCTCGG ACGCACCGGC ATCCGCATCG GCACCGGCTC CCACACCCGC TCGCACCGCC
ACGCCGGCAC CGACACCGGC CGCCGCGATC CGCGCGAGCG AAACACCTGC TGCTCCGCCC
CCCGCACCGT CGGTTCCTCC CGCCCCGCCC AAGCCGCGCG AACCCGACCT CGTCGAGCGC
GCATTCCGCG CCGCACGCGA CTGGCTGCTC GGCGGTAACA CGGTCGTGCG CGTCGGGATC
ATCGTGCTGT TCTTCGGCGT CGCGTTCCTG CTCAAGTACG CGGCCGACAA CAACATGCTG
CCGATCGAAT TCCGCCTCGC CGGCACCGCG CTCGCCGCGG CCGCGCTGCT CGCGATCGGC
TGGCGCGTCC GTACGCGCCG CGCGGCGTAC GGGCTCGTGC TGCAGGGCGG AGGCGTCGGC
ATCCTGTACC TGACGATCTT CGCCGCGACC AAGCTGTACA CACTGCTGCC CGTCGGCGCC
GCGTTCCCGC TGATGGTTGC GGTGTGCGCG CTGAGCGCGT TCCTCGCAGT GCGGCAGAAC
GCACTGCCGC TCGCGTTCAT GGGCACCGCC GGCGGCTTTC TCGCGCCGGT CCTGCTGTCG
ACCGGCCAGG GCAACCATGT CGCGCTGTTC AGCTACTACG CGCTGCTGAA CGCGGGCATC
TTCGCGATCG CCTGGTTCAA GGCCTGGCGT CCGCTGAACC TGCTCGGCTT CGTGTTCACG
TTCACGATCG GCTCGGCGTG GGGCGTGACG GCCTACCGCC CCGCGCTGTT CGCGAGCACC
GAGCCGTTCC TCATCCTGTT CTTCCTGATG TATGTCGGCA TCGCGCTGCT GTATGCGGTG
AAGCGCGAGA TCGCGCTGCG GCACTACGTG GACGGCACGC TCGTGTTCGG CACGCCGATC
GTCGCGACCG CGCTGCAGGC GTCGCTCGTG AAGGACATGC CGTTCGGGCT CGCGTGGAGC
GCCGTCGCGC TGTCGGCGTT CTACGTCGTG GTCACCGCAT GGCTCGCGCG GCGCCGCGAC
CGCCTCGCAC TGCTGTTCGA ATCTACGCTC GCGCTCGCGG TGATCTTCGC GACGCTGGCC
GTGCCGCTCG CGTTCTCGGG CCCGACGACC AGCGCCGCGT GGGCGATCGA AGGCGCGGCC
GTCGTCTGGC TCGGCGTGCG CGAGAAGCGC ATGCTGCGGT TCGGCTTCGG CCTGCTGATG
CAGGTTGCCG CCGCCGGCGC ATTCTTCACG AGCCTGCTCG GGCCGGCCGA CGCCACCGCG
CTGCCGGTGC TCAACAGCCC GACCATCGCG ATGCTGCTGA TCGCGCTCGC CGGCGTGTTC
ACCGGCTGGT GGCTGCACGG ACGCGGCGAA GCACGCGCGT GGCGTGCGTG GATGCCCGAG
ATCGGTGCCG CCGCCGCTGC GTGGGGGCTG CTGTGGTGGG TGAGCGGCGG GCTGCACGAG
ATCCTCGTCT ACGCGAGCCG TCACGTCGAC CTGCATGCCG ACCGCTTCGT CGTCGATTCA
ACCGCGCTGT TCGCGGCCGG CACCGCGTGG CTCGCGCATG TCGCGCGCCG CCGGCTGGCG
TGGCCGCTCG CCGAATGGCC CGCGCTCGCG CTGACGCCGG TGCTGGCGCT GCTTGCGCTG
CGTGCGTTCG ATGCCCACGA AGCGCCGCTG TCGGGGATGG GCGCGTTCGC GTGGCCCGTC
GCCGTCGGCG CAGGCCTCGC GCTGCTATGG CGCCAGTCGC GCGGCACGGC TGGCGCCGAT
TCCGCGCAAC GCACGGTGCC CGGCGTCGCG CCATCCATCT CGGCAGGCAT CATCGCGCCG
CTGCATACGC TGATGTTCTG GACCGTGTGC GGGCTGCTGT CGCTCGAAGG CTTCTGGCGC
CTGCGCGCGT ACGTGCCCGA AGGAGCGTGG AGCTGGAGCG CGTGGGCCTA CGGCTTCGGC
GCGCTGCTCC TGCTGGTGTC GGGCCCCGGC TCGCGGCTGC GCTGGCCCGT CGCGGCGTTT
CCGCGTGCGT ACCAGGTGTG GGGCGCGGCA CCGCTCGCCG CACTGCTGTG GCTGTGGAGC
ATCGCCAGTG TGATCAGCGA CGGCAACGCG GCGCCGCTCT TCTGGCTGCC GCTGCTCAAC
CCGCTCGACA TCGCGCAGTT CCTGGTGTTC GTCGCGTTCG CCGTGTGGCT GCGCCGCCTG
AAAACGCTCG GTATCGCGTG GCATCCGCGC GTCGTCGACT ACGCAGCGAT CGCCACCGTG
TTCCTGTGGT TCAACGCGCT GATGCTGCGC ACGCTGCATC ACCGCTTCCA CATGGTCTAC
GACACCGACA CCGTGCTGTC GTCGTTCGGC ATCCAGCAGG TGTTCATGGT CGGCTGGAGC
CTGTTCGCGT TCGCCGGGAT GTGGCTGACG CGTCGCGACG GCATCGCCCG CGTGTGCGCG
CTCGCGTCGC TGCCGCTGAT CGTCGTGATG TGGGTGTGGA CCTTCTATGC GAACTTCACG
CAGGACGGCG GAAGCTGGGC GCGGGTGCCG CTCTTCAACC CGCTCGACCT CGTGCTCGCG
GTCGTCTATG CGCTCGCCGC GACGTGGTTC GTGCGTGCGC GCAAGCTCGG CTGGTCGTTC
GACATCCATC GCGTCGCGCT GCTGAGTGCG GCCGGCGCAA CCGCGTTCCT GTGGCTGAAC
GCGATCCTGC TGCGCACGCT GCATCACTGG GCCGGCGTGC CGTACGAACT CGGCGCGATG
GCGGAATCGA CGCTCGTGCA GGCGTCGGTG TCCGTGTACT GGACGCTCTG CGCGCTTGCG
ATCACGATCT GGGCGACGCG CCGCGGGCTG CGTCCGCTGT GGTTCGTCGG CGCCGCGCTG
CTTGCGCTCA CGGTCGTCAA GCTGTTCCTG TTCGACCTGT CGCACGTGAC CGGCATCGAG
CGCATCGTGT CGTTCATCGG CATCGGCGTG CTGCTGCTGT TGATCGGGTA TTTCTCGCCG
CTGCCGCCGA AGGCCGCGGC GCAGCAGGAC GACAAAGTAT GA
|
|---|
| Protein sequence | MNWAFTAIGF IVGGIAALIG DFSAITGAVL GAAIGFCLDN TLQQRKRKAK GATPAPFAMQ
APPAQPPVPL AERVARLEAT VETLTREIAS LRGQLAGTKA GTATTDATVH TPTGTASATP
SAPVPPSVAL PPRAPAQPAA ARSDAPASAS APAPTPARTA TPAPTPAAAI RASETPAAPP
PAPSVPPAPP KPREPDLVER AFRAARDWLL GGNTVVRVGI IVLFFGVAFL LKYAADNNML
PIEFRLAGTA LAAAALLAIG WRVRTRRAAY GLVLQGGGVG ILYLTIFAAT KLYTLLPVGA
AFPLMVAVCA LSAFLAVRQN ALPLAFMGTA GGFLAPVLLS TGQGNHVALF SYYALLNAGI
FAIAWFKAWR PLNLLGFVFT FTIGSAWGVT AYRPALFAST EPFLILFFLM YVGIALLYAV
KREIALRHYV DGTLVFGTPI VATALQASLV KDMPFGLAWS AVALSAFYVV VTAWLARRRD
RLALLFESTL ALAVIFATLA VPLAFSGPTT SAAWAIEGAA VVWLGVREKR MLRFGFGLLM
QVAAAGAFFT SLLGPADATA LPVLNSPTIA MLLIALAGVF TGWWLHGRGE ARAWRAWMPE
IGAAAAAWGL LWWVSGGLHE ILVYASRHVD LHADRFVVDS TALFAAGTAW LAHVARRRLA
WPLAEWPALA LTPVLALLAL RAFDAHEAPL SGMGAFAWPV AVGAGLALLW RQSRGTAGAD
SAQRTVPGVA PSISAGIIAP LHTLMFWTVC GLLSLEGFWR LRAYVPEGAW SWSAWAYGFG
ALLLLVSGPG SRLRWPVAAF PRAYQVWGAA PLAALLWLWS IASVISDGNA APLFWLPLLN
PLDIAQFLVF VAFAVWLRRL KTLGIAWHPR VVDYAAIATV FLWFNALMLR TLHHRFHMVY
DTDTVLSSFG IQQVFMVGWS LFAFAGMWLT RRDGIARVCA LASLPLIVVM WVWTFYANFT
QDGGSWARVP LFNPLDLVLA VVYALAATWF VRARKLGWSF DIHRVALLSA AGATAFLWLN
AILLRTLHHW AGVPYELGAM AESTLVQASV SVYWTLCALA ITIWATRRGL RPLWFVGAAL
LALTVVKLFL FDLSHVTGIE RIVSFIGIGV LLLLIGYFSP LPPKAAAQQD DKV
|
|---|
| |