| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0417 |
|---|
| Symbol | |
|---|
| ID | 3752181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 458934 |
|---|
| End bp | 460277 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637765267 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_371177 |
|---|
| Protein GI | 78061269 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00895] benzoate transport |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.578391 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCAA ATATCCGCAA TACGATCGAC GAATCCCCGA TGAGCGCGTT CCAGACGATT
GCCGTCACGG CCTGCGTCGT GCTGAACATG CTCGACGGCT TCGACGTGCT GGCCATCGCG
TTTGCCGCGC CGCACCTGGC AGCCGAATGG AAACTGAGCG GCAAGGAAAT TGGCCTGCTG
CTGAGTGCCG GGCTGGCCGG CATGGGCATC GGCTCGGTGC TGATCGCGCC GCTGGCCGAC
CGCGTCGGCC GACGCCGCAT CATCCTGCTC TGCCTCGCCG TGATCTCGAC CGGAATGCTC
GCCTGCGCGG CCACGCACAG CACGCTGCAA CTCGCCGTCG CGCGTGCGTA CACCGGGCTC
GGCATCGGCG GCATGCTGGC GAGCCTGACC GTCATCAGCG GCGAGTACGC ATCGAACAAA
TGGCGCAGCG CCGCGATCGG CATGCAGTCG GCCGGCTACG CGATCGGCGC CACCGCCGGC
GGCGTCATCG CCGGCTACCT GCTGTCGACG TGGGGATGGC GCAGCGTGTT CGCGTTCGGC
GGCATCCTGA CCGTGCTGTC GATCCCGATG GTACTCACGC TGCTGCCGGA ATCGCTCGAC
TTCCTGCTGG CGAAGCGTCC GGACAACGCG CTGCAGACTA TCAACCGCAT CCTCGCGAGA
ATGAAGCGTG CGCCGATCGA CAGGCTGCCG GCCGCGCCCT CGGCCATCGA CACGGCGAGC
CCCGCGGCGA GCTGGACAGC CGTGCTGCGC GCCCCGCTCG CACGCCGCAC GATCGCGCTG
TGGATCGCGT TCTTCCTCGT GATGGGCAGC TTCTACTTCG TCGTGAGCTG GACGCCGAAG
CTGCTGGTCC AGGCCGGGCT GTCGGCATCG CAGGGCGTCA CCGGCGGCGT ACTGCTCAAC
CTCGGCGGCA TTGCGGGCGC CTCGCTCTTC AGCCTACTGT CGACACGGTT CGGCCTGCGC
AACCTGCTGG GCGCGACACT GCTGCTGGGC GGCGCGCTGA TGGTCGTGTT CGGCGCGAAT
ACGGGCTCGC TCGGCGTCGG GATGACCGTC GCGGTGTTCC TCGGCGCCGT GGTCAACGCA
TGCGTGGCCG GCATGTATGC GCTGTCGCCG ACGCCCTACC CCGTCGAAAT CCGCACGACC
GGGATCGGCC TCGCGGTCGG CATCGGTCGC CTCGGCGCGA TCCTGTCGCC GATGACGGTC
GGCGCGCTGC TGGACGACGG CTGGTCCGTG TCCCATCTCT ATCTCGCGTT TCTCGTGCCG
ATGGCCGGCG CGGCAATCGC AGTCGCCGTG GCGGGCTCGC GTGCCGCGGC ACCGAGCCGG
CGACGCGACC CGGCGATGCC GTAA
|
|---|
| Protein sequence | MSANIRNTID ESPMSAFQTI AVTACVVLNM LDGFDVLAIA FAAPHLAAEW KLSGKEIGLL
LSAGLAGMGI GSVLIAPLAD RVGRRRIILL CLAVISTGML ACAATHSTLQ LAVARAYTGL
GIGGMLASLT VISGEYASNK WRSAAIGMQS AGYAIGATAG GVIAGYLLST WGWRSVFAFG
GILTVLSIPM VLTLLPESLD FLLAKRPDNA LQTINRILAR MKRAPIDRLP AAPSAIDTAS
PAASWTAVLR APLARRTIAL WIAFFLVMGS FYFVVSWTPK LLVQAGLSAS QGVTGGVLLN
LGGIAGASLF SLLSTRFGLR NLLGATLLLG GALMVVFGAN TGSLGVGMTV AVFLGAVVNA
CVAGMYALSP TPYPVEIRTT GIGLAVGIGR LGAILSPMTV GALLDDGWSV SHLYLAFLVP
MAGAAIAVAV AGSRAAAPSR RRDPAMP
|
|---|
| |