Gene Bcep18194_B0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B0345 
SymbolaroE 
ID3752104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp368835 
End bp369689 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content70% 
IMG OID637765190 
Productshikimate 5-dehydrogenase 
Protein accessionYP_371105 
Protein GI78061197 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.916967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.720007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC CGTCGTTTCT GATCGGCCTG ATCGGCCAGG GCATCGGCGG CTCGCTGTCG 
CCCGCGATGC ACGAGGAAGA AGGATTCCGC CAGGGGTTCG GCTATGTCTA CCGGCGCATC
GACCTCGACG CGCTCGGCGT GACCGTCGAC GCCTTGCCGC AACTGCTCGA TGCCGCGCAG
CGGATGGGCT ACAACGGCCT GAACATCACA CACCCGTGCA AGCAGCGCGT GATCGAGCAC
CTCGACGCAC TGTCGGACGA TGCGCGCGCG CTCGGCGCGG TGAACACCGT GCTGTTCAAG
GACGGCAAGC GGATCGGCCA CAACACCGAC TGGTCGGGCT TCGCGAAGTC GTTCCGCCGC
GGGTTGCCCG ACGCGTCCCT CGAGCGCGTC GTCCAGCTCG GTGCGGGCGG CGCGGGCGCG
GCCGTGGCGC ACGCGGCGCT GCAGATGGGC GCGGCCGAAC TGACGATTTT CGATGTCGAC
GGCACGCGCG CCGCCGCGCT CGCGGCCGAA CTGCAGCAAC GCTTCCCCGC CGCACGGGTC
GCGCCCGGTG GTGATCTCGC GAGCGCGATG CGCGCCGCGA CGGGCCTGAT CCACGCGACG
CCCACCGGCA TGGCCAAGCA TCCGGGCCTG CCGCTGCCGG CCGAGTTGCT CCACGCGGGC
ATGTGGGTGG CCGACATCGT GTACTTCCCG CTCGAAACCG AACTGATCCA CGCGGCGCGC
GCAGCCGGCT GCGCCACGTT GCCGGGCGGC GGGATGGCCG TCTACCAGGC TGTCGACGCG
TTCGAGATCT TCACCGGACG CACGCCCGAC GCCGAGCGGA TGTTCGATCA CTTTCAGTCG
CTCGTCGCGC GCTGA
 
Protein sequence
MSRPSFLIGL IGQGIGGSLS PAMHEEEGFR QGFGYVYRRI DLDALGVTVD ALPQLLDAAQ 
RMGYNGLNIT HPCKQRVIEH LDALSDDARA LGAVNTVLFK DGKRIGHNTD WSGFAKSFRR
GLPDASLERV VQLGAGGAGA AVAHAALQMG AAELTIFDVD GTRAAALAAE LQQRFPAARV
APGGDLASAM RAATGLIHAT PTGMAKHPGL PLPAELLHAG MWVADIVYFP LETELIHAAR
AAGCATLPGG GMAVYQAVDA FEIFTGRTPD AERMFDHFQS LVAR