Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B0297 |
Symbol | |
ID | 3752056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | + |
Start bp | 319327 |
End bp | 320862 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637765142 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_371057 |
Protein GI | 78061149 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAACT TGCACAACAC GAATGGCCTG ATGCGCTTCG CAAAGGTGGC GGCCGCGAGC ACCCTGCTCG CGACGCTGCT CGCCGCGTGC GCGGTGGGCC CCGACTACAA GCGCCCGGAT GTGTCGACGC CGACGGCGTT CAAGGAAGCG CCGACGCTCG CCGCCGGCGA ACAGGCCGGC ACGTGGAAGA CGGCCGAGCC GTCGGACGGC GCGCATCGCG GCGAATGGTG GAAGGCGTTC GGCGACCCGG TGCTCGATTC GCTCGAGACG CAGGCGCTCG CCGCGAACCA GAACCTGAAG GCCGCGGCCG CGCGTGTCGA GGAAGCGCGC GCGGCGACGC GTTCGGCGCG CTCGCAGTGG TTCCCGCAGA TCGGTGCCGG CTTCGGGCCG ACGCGCGAGG GGCTGTCGTC GGCATCGCAG TTCCAGCCGC AGGGCACGGG GCCGACCAAT GCGACGTTGT GGCGCGCGCA GGGCACGGTG TCGTACGAGG CCGACCTGTT CGGCCGCGTC GGCCGCAACG TCGAGGCGTC GCGTGCCGAC CAGGCGCAGA GCGAAGCGCT GTTCCGTTCG GTACAGCTCG CGCTGCAGGC TGACGTCGCG CAGAACTACT TCGGACTGCG TCAGCTCGAT TCCGACCAGG ACCTGTACCG CCGCACGGTG GAGTTGCGCG AGCAGGCACT GAAGCTCGTG CAGCGCCGCT TCAACGAAGG CGACATCAGC GAGCTCGACG TGTCGCGCGC GAAGAACGAG CTGGCGACCG CGCAGGCCGA TGCGGTTGGC GTCGCGCGCC GGCGCGCGGC ATCCGAGCAT GCGCTCGCGA TCCTGCTCGG CAAGGCGCCC GCGGATTTCG CGTTCAAGGA AACGCCGATC GTGCCGGTCG CGGTGAAGGT GCCGCCGGGC CTGCCGTCCG CGCTGCTCGA ACGTCGTCCG GACGTGTCGG CGGCCGAGCG TGCGATGGCG GCCGCGAACG CGCGGATCGG GCTCGCGAAG TCGGCGTACT TCCCGAAGCT CGACATCACG GGGGCGTTTG GCTATGAAGC GTCGACGCTC GGCAGCCTGT TCATGTGGTC GAGCCGCACG TTCCTGCTCG GGCCGTTTGC CGGCACCGCG CTGACGTTGC CGCTGTTCGA CGGCGGGCGT CGTGCGGCCG GCGTGCAGCA GGCACGCGCG CAGTACGACG AGCAGGTTGC GAACTACCGG CAACAGGTGC TCGTCGCGTT CCGCGAGGTC GAGGACAATC TCGCCGACCT GCGCCTGCTC GACGACCAGA TCCGCGCACA GGATGCGGCC GTCAACGCGT CGCGGCGCGC GGCGACCTTG TCGCGCACGC AGTATCAGGA AGGCGAGGTC GCGTATCTCG ACGTGATCGA CAGCGAGCGC TCGGTGCTGC AGTCGCAACT GCAGGCGAAC CAGTTGACCG GCGCGCAGGC GGTGTCGACC GTGAACCTGA TCCGCGCGTT GGGCGGCGGT TGGGGGGCGG CGCCGACGGC GGTGGGCGAT GCGGCGTCCG TCAAGGCGGA AGTGGCGGCG CGTTGA
|
Protein sequence | MNNLHNTNGL MRFAKVAAAS TLLATLLAAC AVGPDYKRPD VSTPTAFKEA PTLAAGEQAG TWKTAEPSDG AHRGEWWKAF GDPVLDSLET QALAANQNLK AAAARVEEAR AATRSARSQW FPQIGAGFGP TREGLSSASQ FQPQGTGPTN ATLWRAQGTV SYEADLFGRV GRNVEASRAD QAQSEALFRS VQLALQADVA QNYFGLRQLD SDQDLYRRTV ELREQALKLV QRRFNEGDIS ELDVSRAKNE LATAQADAVG VARRRAASEH ALAILLGKAP ADFAFKETPI VPVAVKVPPG LPSALLERRP DVSAAERAMA AANARIGLAK SAYFPKLDIT GAFGYEASTL GSLFMWSSRT FLLGPFAGTA LTLPLFDGGR RAAGVQQARA QYDEQVANYR QQVLVAFREV EDNLADLRLL DDQIRAQDAA VNASRRAATL SRTQYQEGEV AYLDVIDSER SVLQSQLQAN QLTGAQAVST VNLIRALGGG WGAAPTAVGD AASVKAEVAA R
|
| |