| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0228 |
|---|
| Symbol | |
|---|
| ID | 3751829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 244788 |
|---|
| End bp | 245570 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637765073 |
|---|
| Product | lysine/arginine/ornithine ABC transporter periplasmic ligand-binding protein |
|---|
| Protein accession | YP_370988 |
|---|
| Protein GI | 78061080 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.892568 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.956195 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAGA TTCTTGCGGC TGTGACCGTA GCCCTGCTCG CCGTATCGGC AGGCACCGCG
TATGCGAAGG ACTGGACGAC CGTGCGGTTC GGCGTCGACG CAAGCTACCC GCCTTTCGAA
TCGAAAGGCG CTGACGGCAA GGTGGTCGGG TTCGACGTCG ACCTCGGCAA CGAAATCTGC
CGCCGCATGA ACGCGAAGTG CGTGTGGATC GAAAACGACT TCGACGGGAT GATTCCGGCA
CTGAAGGCCC GCAAGTTCGA CGGCGTGCTG TCGTCGATGT CGATGACGCC GGCGCGTCAG
GAGCAGATCG CCTTCTCGGC GAAGCTGTTC AACACGCCGA CGCGCCTCGT GACGAAGAAG
GGCGCCGGCC TGATGCCGAC GGCCGAATCG CTGAAGGGCA AGTCGGTCGG CGTCGAGCAG
GGCACGATCC AGGAAACCTA TGCGAAGACG TACTGGGCCT CGAAGGGCGT GAACGTCGTG
CCTTACCAGA ACCAGGACCA GGTCTACGCC GACCTGATCT CCGGCCGTCT GGACGGCGCG
CTGCAGGATG CGGTGCAGGC TGAAATCGGC TTCCTGAAGA CGCCGCGCGG CGCGAACTTC
GATTTCGCCG GCAAGGATCT CGACGATCCG AAGACGCTCG GCGAAGGCGC CGGCATCGGC
CTGCGCAAGG AAGACACCGA CCTGAAGGCG AAGATCGACG GCGCGATCGC CGGCATGCGC
AAGGACGGCA CGTACGCGAA GATCGCGAAG AAGTACTTCG ATTTCGACGT CTACGGCAAG
TAA
|
|---|
| Protein sequence | MKKILAAVTV ALLAVSAGTA YAKDWTTVRF GVDASYPPFE SKGADGKVVG FDVDLGNEIC
RRMNAKCVWI ENDFDGMIPA LKARKFDGVL SSMSMTPARQ EQIAFSAKLF NTPTRLVTKK
GAGLMPTAES LKGKSVGVEQ GTIQETYAKT YWASKGVNVV PYQNQDQVYA DLISGRLDGA
LQDAVQAEIG FLKTPRGANF DFAGKDLDDP KTLGEGAGIG LRKEDTDLKA KIDGAIAGMR
KDGTYAKIAK KYFDFDVYGK
|
|---|
| |