| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0168 |
|---|
| Symbol | |
|---|
| ID | 3751866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 187436 |
|---|
| End bp | 189109 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637765013 |
|---|
| Product | Type I phosphodiesterase/nucleotide pyrophosphatase |
|---|
| Protein accession | YP_370928 |
|---|
| Protein GI | 78061020 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.219155 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.140282 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTCC TTGGTAAGCA GCGGAAGTTG GTGGCGATGG TGGCGGGCGC GCTGGCGCTC
GCCGGCGCGG GTGCGCACGC GGCGCAGCAG GACGGCAACA GTCAGGGCGA GGACCGCGGC
CACGCGAACC GCGTCGTGAA GCATGTGCTG CTGATCAGCG TCGACGGCCT GCACGAGCAG
GATCTCGCGC GCTGCATCGG CGCGAACACG TGCCCGAACA TCGCGGTGCT CGCGAAGAGC
GGCGTGACGT ACACGAATGC CTATACGCCG GGCCTGTCGG ATTCGTTCCC CGGCCTCGCC
GCGCTCGTGA CGGGCGGCTC GCCGAAGACG GCCGGCCTGT TCTACGACGT GTCGTACGAC
CGCAACCTGT ACGCGCCGGG TGATACGAGC TGTTCGGGCA AGCAAGGCTG GAACGTCGTG
TTCGACGAAA CGACCGGCAT CGATGCCGAG AACGGCGGCG CGCTCGTTCA CCTGAACGGC
GGCGGCGCAT TCAACCCGCA GGCGATCCCG AACGCGAAGG TCAACGGCAA GTGCGTGCCG
GTCTATCCGC ACAACTACGT GAAGACCAAC ACCGTGTTCG AGGCCGTGAA GGCCGGCATT
CCGAACGCAA CCACCGCGTG GGCCGACAAG CACGCATGGG GCTACGACTG GCTGAACGGG
CCGTCGGGCA CCGGCGTCGA CGATCTGATG CGCACCGAGA TCAACTCGAT CGACCCGGTG
ACGAAGACGG ACTACACGGA CGTCTATTCG CATACCGCGC AGTTCGACAA CCTGCACGTG
CAGGCGCTGA TCAACCAGAT CAACGGCCGC GACTCGACGG GCACGAAGAG CGCGCCGGTG
CCGACGCTGT TCGGCGCCGA CTTCCAGACG CTGAGCGTCG CGCAGAAGGC GGTGGTGACG
AAGGGCGGCG GCTACCTGGA TGCCAACTTC ACGCCGAACG GGCAGGTCGC GAATGCGATC
ACGTACGTCG ACAACTCGAT CGGTTATATC GTCGCGGCGC TGAAGCAGGC GAGCCTGTAT
TCGTCGACCG CCGTGATCGT CACGTCGAAG CATGGCCAGT CGCCGACCGA TCACACGAAG
CTCGTGAAGA ACGGCGACAC GCTGACGAAG CTGCTCGAAA CGAACAACTA CCTCGACCCG
AACGGCAACT TCGGCCAGGC CAACACGAAG ACGGGCAACC TGAACGACGG CTCCGGCCTG
GTCGACACGG GCTTCGTGCA GACCGACGAC GTCGGCCTGA TCTGGCTGCG CGACCGCAAC
CAGCGCACGG CCGTGGTGCA GACGCTGAAG GCGAACCTGG GCTGCAACGC GCCGGGGATT
TGCGCGGACG GCTCGCAGGC GTACATCCTG TACGGCGCGG CGCTCGCCGA GCGCTTCGGC
GATCCGGCCA ACGGCCGCAC GCCGGACATC ATCGTCCAGC CGAATCCGGG CGTGATCTAC
ACGTCGAGCA CGAAGAAGGA CGAGGAGCAC GGCGGCAACG CGCCGGACGA CAGCCACCTC
GGCCTGCTCG TGTCGTATCC GGGCCTGCAT CGCGCACGCA CGGTGACCGA CACGGTCGGC
ACGAAGCAGG TCGCGCCGAC GATCCTCGGG CTGCTCGGCG CGAACCCGCG CCTGCTGCAT
GCCGTGGTGG CCGAGAATAC CGGCGTGCTG CCGGGGCTCG GTATCGGTCG CTAA
|
|---|
| Protein sequence | MSFLGKQRKL VAMVAGALAL AGAGAHAAQQ DGNSQGEDRG HANRVVKHVL LISVDGLHEQ
DLARCIGANT CPNIAVLAKS GVTYTNAYTP GLSDSFPGLA ALVTGGSPKT AGLFYDVSYD
RNLYAPGDTS CSGKQGWNVV FDETTGIDAE NGGALVHLNG GGAFNPQAIP NAKVNGKCVP
VYPHNYVKTN TVFEAVKAGI PNATTAWADK HAWGYDWLNG PSGTGVDDLM RTEINSIDPV
TKTDYTDVYS HTAQFDNLHV QALINQINGR DSTGTKSAPV PTLFGADFQT LSVAQKAVVT
KGGGYLDANF TPNGQVANAI TYVDNSIGYI VAALKQASLY SSTAVIVTSK HGQSPTDHTK
LVKNGDTLTK LLETNNYLDP NGNFGQANTK TGNLNDGSGL VDTGFVQTDD VGLIWLRDRN
QRTAVVQTLK ANLGCNAPGI CADGSQAYIL YGAALAERFG DPANGRTPDI IVQPNPGVIY
TSSTKKDEEH GGNAPDDSHL GLLVSYPGLH RARTVTDTVG TKQVAPTILG LLGANPRLLH
AVVAENTGVL PGLGIGR
|
|---|
| |