| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0105 |
|---|
| Symbol | |
|---|
| ID | 3752000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 111346 |
|---|
| End bp | 112506 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637764951 |
|---|
| Product | radical SAM oxidoreductase |
|---|
| Protein accession | YP_370866 |
|---|
| Protein GI | 78060958 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCTATTC CGCTGCTCCA GCAAGTCCGC GTCGGCGCGT ACATCACGCG CCAACACCTG
TCCGGCAACA AACGCTATCC GCTCGCGCTG ATGCTCGAGC CGCTGTTCCG CTGCAACCTC
GCGTGCAACG GCTGCGGCAA GATCGATTAC CCGGACCCCA TCCTGAACCA GCGTCTGTCC
GTCCAGGAAT GCCTGGAAGC GGTCGACGAG TGCGGCGCAC CGATCGTGTC GATCGCGGGC
GGCGAGCCGC TGCTGCACAA GGAAATGCCG GAAATCGTCC GCGGCATCAT GAAGCGCAAG
AAGTTCGTCT ACCTCTGCAC GAACGCGCTG CTGATGGAAA AGAAGATGGA CGACTACCAG
CCGAGCCCGT ACTTCGTCTG GTCGGTCCAC CTCGACGGCG ACCAGCAGGC GCACGACCAC
TCGGTGTCGC AGGAAGGCGT GTACGACAAG GCCGTCGCGG CGATCAAGGA AGCGAAGCGC
CGCGGCTTCC GCGTGAACAT CAACTGCACG CTGTTCAACG ATGCGGTACC GGAACGCGTC
GCGAAGTTCT TCGATACGCT CAAGCCGATC GGCGTCGACG GCATCACCGT GTCGCCGGGC
TACGCGTACG AGCGCGCGCC GGATCAGCAG CACTTCCTGA ACCGCGACAA GACGAAGAAC
CTGTTCCGCG AAATCCTGAA GCGCGGTGAA GGCGGCAAGC GCTGGTCGTT CAGCCAGTCG
TCGCTGTTCC TCGACTTCCT GGCCGGCAAC CAGACGTACA AGTGCACGCC GTGGGGCAAC
CCGGCGCGTA CGGTGTTCGG CTGGCAAAAG CCGTGCTACC TGGTCGGCGA AGGTTACGTG
AAGACCTTCA AGGAACTGAT GGAAGACACG AACTGGGACA ACTACGGCGT CGGCAACTAC
GAGAAGTGCG CGGACTGCAT GGTCCACTGC GGCTTCGAAG CGACCGCCGT GATGGACACG
ATGGCGCACC CGCTGAAGGC GTTCGCCGTG AGCCGCAAGG GCATCAAGAC CGACGGCCCG
TTCGCTCCGG ACATTCCGAT CGACAAGCAG CGCCCGGCCG AGTACGTGTT CTCGCGCCAC
GTCGAGATCA AGCTCGAAGA AATCCAGCGC GCCGGCAAGG GCAAACTGCA GAAGGCGGCG
AAGCCGGCAG CAGCAGCCTG A
|
|---|
| Protein sequence | MSIPLLQQVR VGAYITRQHL SGNKRYPLAL MLEPLFRCNL ACNGCGKIDY PDPILNQRLS
VQECLEAVDE CGAPIVSIAG GEPLLHKEMP EIVRGIMKRK KFVYLCTNAL LMEKKMDDYQ
PSPYFVWSVH LDGDQQAHDH SVSQEGVYDK AVAAIKEAKR RGFRVNINCT LFNDAVPERV
AKFFDTLKPI GVDGITVSPG YAYERAPDQQ HFLNRDKTKN LFREILKRGE GGKRWSFSQS
SLFLDFLAGN QTYKCTPWGN PARTVFGWQK PCYLVGEGYV KTFKELMEDT NWDNYGVGNY
EKCADCMVHC GFEATAVMDT MAHPLKAFAV SRKGIKTDGP FAPDIPIDKQ RPAEYVFSRH
VEIKLEEIQR AGKGKLQKAA KPAAAA
|
|---|
| |