| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0033 |
|---|
| Symbol | |
|---|
| ID | 3751790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 38275 |
|---|
| End bp | 39774 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637764879 |
|---|
| Product | glycolate oxidase subunit GlcD |
|---|
| Protein accession | YP_370794 |
|---|
| Protein GI | 78060886 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTCA CCTACGACGA ACGGATCGAC GGCCCATTGG CGACCGTCGG CCGCGACACA
CTCGTCGCCG CGCTGCACGC GGCGGCGCCC GGCCTCGACG TGCTGCACGA ACGCGAGGCG
CTCAAGCCGT TCGAATGCGA CGGCCTCGCC GCGTACCGCA CGGTGCCGCT CGCGGTCGCG
CTGCCCGACA CGGTCGAGCA AGTGCGCGCG GTGTTGCGTG TCGCGGCCGC GCTCGGCGTG
CCGGTGGTTG CGCGCGGCGC GGGCACCGGC CTGTCGGGCG GCGCGATGCC CCTCGAAAAA
GGCCTCCTGC TCGTGATGGC GAAGTTCAAC AGGATTCTCG ACATCGACCC CGATGCCGGC
ATCGCGCGCG TGCAGCCCGG CGTGCGCAAC CTCGCGATTT CCCAGGCAGC CGCGCCATAC
GGCCTCTACT ACGCCCCCGA TCCGTCGTCG CAGATCGCCT GCTCGATCGG CGGCAACGTC
GCCGAAAACG CGGGCGGCGT GCACTGCCTG AAATACGGCC TCACGGTGCA CAACATCCTG
AAGGTCGAGA TCCTGACGAT CGACGGCGAC ACGCTCACGC TCGGCGCCGA CGCGCTCGAC
GCACCCGGCT TCGACCTGCT CGCCTTGTTC ACCGGCTCGG AAGGGATGCT CGGCATCGTC
ACGGAAGTCA CGGTGAAGCT GCTGCCGAAG CCGCCGAGCG TGAAGGTGCT GATGGCGAGC
TTCGACGACG TCGCGGAAGC CGGCGCGGCG GTCGCGCGAA TCATCGGCGC GGGCGTGATC
CCCGGCGGCC TCGAGATGAT GGACAACCTC GCGATCCGCG CGGCGGAGGA TTTCATCCAC
GCGGGCTACC CGGTCGACGC GCAGGCGATC CTGCTGTGCG AGCTCGACGG CTCGCCGACC
GACGTCGACG AAGACGCCGA ACGCGTCGCC ACGCTGCTGC GCGACGCGGG CGCAACCGAG
ATCCGCGTCG CGCGCGACGA AGCCGAGCGC CAGCGCTTCT GGGCCGGCCG CAAGAACGCA
TTCCCGGCGG TCGGCCGCAT GTCGCCCGAC TACTACTGCA TGGACGGCAC GATTCCGCGC
CGCGAGCTGC CGCGCGTGCT CGAAGGCATT GCCGCGCTGT CCGCCGAATA CGGGCTGCCG
GTCGCGAACG TGTTCCACGC GGGCGACGGC AACATGCACC CGCTGATCCT GTTCGACGCG
AACCGCGCGG GCGAGCTCGA CCGCGCGGAA GCGCTCGGCG GAAAGATCCT CGAGCTGTGC
GTCGCGGCGG GCGGCAGCAT CACCGGCGAG CACGGCGTCG GGCGCGAGAA GATCAACCAG
ATGTGCGTGC AATTCAACGC CGATGAAATC ACGTTCTTCC ACGCTGTGAA GGCCGCGTTC
GATCCGCAGG GCCTGCTCAA TCCCGGCAAG AACATCCCGA CGCTGCACCG CTGCGCCGAA
TTCGGCGCGA TGCACGTCCA TCACGGCAAG CTGCCGTTTC CCGAACTGGA GCGCTTCTGA
|
|---|
| Protein sequence | MSFTYDERID GPLATVGRDT LVAALHAAAP GLDVLHEREA LKPFECDGLA AYRTVPLAVA
LPDTVEQVRA VLRVAAALGV PVVARGAGTG LSGGAMPLEK GLLLVMAKFN RILDIDPDAG
IARVQPGVRN LAISQAAAPY GLYYAPDPSS QIACSIGGNV AENAGGVHCL KYGLTVHNIL
KVEILTIDGD TLTLGADALD APGFDLLALF TGSEGMLGIV TEVTVKLLPK PPSVKVLMAS
FDDVAEAGAA VARIIGAGVI PGGLEMMDNL AIRAAEDFIH AGYPVDAQAI LLCELDGSPT
DVDEDAERVA TLLRDAGATE IRVARDEAER QRFWAGRKNA FPAVGRMSPD YYCMDGTIPR
RELPRVLEGI AALSAEYGLP VANVFHAGDG NMHPLILFDA NRAGELDRAE ALGGKILELC
VAAGGSITGE HGVGREKINQ MCVQFNADEI TFFHAVKAAF DPQGLLNPGK NIPTLHRCAE
FGAMHVHHGK LPFPELERF
|
|---|
| |