| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0010 |
|---|
| Symbol | |
|---|
| ID | 3751767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 10713 |
|---|
| End bp | 13007 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 764 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637764856 |
|---|
| Product | periplasmic sensor hybrid histidine kinase |
|---|
| Protein accession | YP_370771 |
|---|
| Protein GI | 78060863 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00266104 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCAG GCACCTCCGC CTCACCCGCT TCCTCGATGA CGTCCGACCG GCCCGCCGAT
TCCCACGCTC CCGCCTCCCC ACCCGCCGAC GACTGGCAGG ACGACGGCAA CTACGCGTCC
GGTGCGCCCG AGCACGATTT CGCGGTGCGT CGCGTGACGC TGATCGTGCT GCTCGTCGCG
GCGATCGTAC TGCCGTGCAT CTACGTCGTG GTGATGGCGT ACAACGACCT GAAGACGCGC
GAGGCCGCCG CGAGCGACGT GACGATGCGC ACGGTGCGAG TGGCCGAGGA GCACGCGCTC
AAGGTGTTCG ACCTGAGCGA AACGCTCGAT GCGCGCATCG TCGATCTCGT GCAGGACATG
GACGACGCGA CCGTGCGCAA CCGGGAGTCC GACATCCACG AAGCGCTGAA CACGATCGGC
GGCGGCTATC CGCAGGTGGC CGCCGTGTCG ATCTTCGGCG CGAGCGGGAT GCTGCTCGCG
AACAGCCTCT ACTATCCGGC GCCCTATGCG TCGATCGCGA ACCGCGACGA CTTCGCCGGC
ATCCGTGACG GCAAGGTCAT CGAACACATC TCGCGGCTGA TGATGGGGCC GCTCAAGCTC
GAGAACATTC CCGTGTTCAA CACGGGCGTC GCGCGCCGCC ATAGCGATGG TTCGTTCGCC
GGGATGGTGT CGATCGCGCT GAAGTCGTCG TATTTCAACG CGTTCTACCG CGACCTGCTC
GGCGGCGCGA GCACGCCGAT GACGATGGCG CTCGCGCGTT CGGACGGCGC GGTGATCGCG
TCGTATCCGC CGCCGCCGGC ACTCGCGCAC ACCGATCGCG CGGTCACGTT CGGCGACGCG
CGCAACGATC CGCGCGCCGG TGTCGTGCGC GTGCGCCACG ACGGCGCGAG CAGCGAAATC
GTCGCGTATC GCCAGGTCGG CAGCTATCCC GTCTACGTGA CGTGCGCGTA CCGCACGTCG
GCGATCTGGC ATGAATGGTA CGAACACCTG AGCGTGTTGT TCATCTCGAT GTTCGCGCCG
TCGGTCGCGC TGTGGTCCGT GATCTGGCTG TCGCTCAAGC GGCTGAAGGC GGAAGAGGAG
GCGTGGGACC GCTGGCAGGC CGAAGCGTCG ATGCGGCGCT CGATCGAATC GGCGTACCGG
CAGTCGCGCA AGATGCAGGC GCTCGGCAAC CTCGTCGGCA GCGTCGCGCA CGACTTCAAC
AACCTGCTGA TGATCATCTC GAGCAACGTG CAGATCGTGC GGCGGCGCGG GGTCCAGCAT
CTCGACAAGG AGCTCGGCGC GATCGAACGC GCGCTGAAGA ACGGGCAGTC GCTCACGCGC
CAGCTCCTCG GCGTCGCGCG CAAGCAGCCG CTGCACAACG AGACGATCGA CGTCGGGCAA
TGGGTCGGCA CGTGCCGCGA ACTGCTGAAG ACATCGCTCG GTTCGAAATC GTCGCTGGTC
GTCGCGATCG AGCCCGGTGT CTGGCCGATC CGCGTCGACG TCGCGGAGCT CGAGCTCGCG
GTGATTAACC TCGCGGTCAA CGCGCGCGAC GCGATGGCGA CCGGCGGCCG CTTCACGGTC
GGCGCGCGCA ACGTGACGCT GCGTCGCGAG GACGGCTTTC CGCTGACCGG CGACTTCGTG
CAGATCTCGC TCGACGATAC GGGTTCGGGC ATGGCGCCCG ACGTGCTCGC GCGTGCGTTC
GAGCCGCTGT TCACGACGAA GGCGCAGGGG ATGGGGACCG GGCTCGGCCT GCCGCAGGTG
TTCGCGTTCT GCGAACGCTC GGGCGGGCTC GCGACGATCG ACAGCGCGGT CGGCGCCGGC
ACGTCGGTGC GTCTCTACCT GCCGCGCGCC CGCGCCGAGG ATGTCGTCGC GCGGCCGCAG
GCGGTCGTGC ACGACGCGGG GGCAGGCGCG CTCGCCGGCC TGCACGTGCT GCTCGTCGAG
GACAACAGCG AAGTCGCGGC CGGCACCGAA GCGCTGCTGT CGCTGCTCGG GCATCGCGTG
ACCTACGCGC CCACCGCCGA CGACGCGTTG CGCCTGATCG AAGGTGCAGC CGCGAACGAC
GCGTTCGACC TCGTGATTTC GGATATCCAC ATGCCGGGCC GCCTGAACGG CATCGACCTC
GCCGAAGCCG TCGAGCAGCG GCCGGAGAAA CTGCCCGTGA TTCTCGTCAC GGGTTACGCG
GAGGAGCTCG ACCGCACGCG CACCGTCAAC GTCCGCGTGC TGTCGAAGCC GTTCGACATC
GCGCTGCTCG ACGAGATCCT GCTGGGCATC CGTGAAGCGC GCGATGCACG ACACGCGCGG
CACGCCGGCA CGTGA
|
|---|
| Protein sequence | MMAGTSASPA SSMTSDRPAD SHAPASPPAD DWQDDGNYAS GAPEHDFAVR RVTLIVLLVA
AIVLPCIYVV VMAYNDLKTR EAAASDVTMR TVRVAEEHAL KVFDLSETLD ARIVDLVQDM
DDATVRNRES DIHEALNTIG GGYPQVAAVS IFGASGMLLA NSLYYPAPYA SIANRDDFAG
IRDGKVIEHI SRLMMGPLKL ENIPVFNTGV ARRHSDGSFA GMVSIALKSS YFNAFYRDLL
GGASTPMTMA LARSDGAVIA SYPPPPALAH TDRAVTFGDA RNDPRAGVVR VRHDGASSEI
VAYRQVGSYP VYVTCAYRTS AIWHEWYEHL SVLFISMFAP SVALWSVIWL SLKRLKAEEE
AWDRWQAEAS MRRSIESAYR QSRKMQALGN LVGSVAHDFN NLLMIISSNV QIVRRRGVQH
LDKELGAIER ALKNGQSLTR QLLGVARKQP LHNETIDVGQ WVGTCRELLK TSLGSKSSLV
VAIEPGVWPI RVDVAELELA VINLAVNARD AMATGGRFTV GARNVTLRRE DGFPLTGDFV
QISLDDTGSG MAPDVLARAF EPLFTTKAQG MGTGLGLPQV FAFCERSGGL ATIDSAVGAG
TSVRLYLPRA RAEDVVARPQ AVVHDAGAGA LAGLHVLLVE DNSEVAAGTE ALLSLLGHRV
TYAPTADDAL RLIEGAAAND AFDLVISDIH MPGRLNGIDL AEAVEQRPEK LPVILVTGYA
EELDRTRTVN VRVLSKPFDI ALLDEILLGI REARDARHAR HAGT
|
|---|
| |