Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B0008 |
Symbol | |
ID | 3751765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | - |
Start bp | 9139 |
End bp | 9738 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637764854 |
Product | RNA polymerase sigma factor |
Protein accession | YP_370769 |
Protein GI | 78060861 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000310546 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTCCG CCTACGACGA TCCCGTTTAT CTCGCGCAAC TGCGGCGCGA CCTGTTGCGC TTCGCGCGAC TCCAGCTCCG CGACGCCGAC GCGGCCGAAG ACGCCGTGCA GGAAGCGCTC ACCGCCGCGT GGTCGCATGC GGGCGATTTC GCCGGGCTGT CGGCGCACAA GACCTGGGTG TTCGGCATCC TGCGCAACAA GCTGATCGAC GTACTGCGCG CGCGGCAGCG GACGGTGAGC CTGTCCGCGC TCGATGCCGA GCTCGACGGC GAATCGGTGC TCGATCGCGA GTTGTTCAAG GAAAACGGGC ACTGGGCCGC CCACGCGAAG CCGCGACCGT GGCCGCGCCC CGAAACGCTG TTGCAGCAGC AGCAGTTCTG GACGCTGTTC GAGGCCTGCC TCGATCACCT GCCGGAGCAG ATCGGACGCG TGTTCATGAT GCGCGAATTT CTCGACTTCG AAATGACGGA CATCTGCAGC GAATTGACGC TGACGACGAA CCATTGCAGC GTGCTGCTGT ACCGGGCGCG CACGCGACTG CGAACCTGCC TGAGCGAACA AGGACTGACG ACCGAAGATG CTGCCGGGGA AATGTACTGA
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Protein sequence | MPSAYDDPVY LAQLRRDLLR FARLQLRDAD AAEDAVQEAL TAAWSHAGDF AGLSAHKTWV FGILRNKLID VLRARQRTVS LSALDAELDG ESVLDRELFK ENGHWAAHAK PRPWPRPETL LQQQQFWTLF EACLDHLPEQ IGRVFMMREF LDFEMTDICS ELTLTTNHCS VLLYRARTRL RTCLSEQGLT TEDAAGEMY
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