Gene Bcep18194_B0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B0008 
Symbol 
ID3751765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp9139 
End bp9738 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content65% 
IMG OID637764854 
ProductRNA polymerase sigma factor 
Protein accessionYP_370769 
Protein GI78060861 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000310546 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCCG CCTACGACGA TCCCGTTTAT CTCGCGCAAC TGCGGCGCGA CCTGTTGCGC 
TTCGCGCGAC TCCAGCTCCG CGACGCCGAC GCGGCCGAAG ACGCCGTGCA GGAAGCGCTC
ACCGCCGCGT GGTCGCATGC GGGCGATTTC GCCGGGCTGT CGGCGCACAA GACCTGGGTG
TTCGGCATCC TGCGCAACAA GCTGATCGAC GTACTGCGCG CGCGGCAGCG GACGGTGAGC
CTGTCCGCGC TCGATGCCGA GCTCGACGGC GAATCGGTGC TCGATCGCGA GTTGTTCAAG
GAAAACGGGC ACTGGGCCGC CCACGCGAAG CCGCGACCGT GGCCGCGCCC CGAAACGCTG
TTGCAGCAGC AGCAGTTCTG GACGCTGTTC GAGGCCTGCC TCGATCACCT GCCGGAGCAG
ATCGGACGCG TGTTCATGAT GCGCGAATTT CTCGACTTCG AAATGACGGA CATCTGCAGC
GAATTGACGC TGACGACGAA CCATTGCAGC GTGCTGCTGT ACCGGGCGCG CACGCGACTG
CGAACCTGCC TGAGCGAACA AGGACTGACG ACCGAAGATG CTGCCGGGGA AATGTACTGA
 
Protein sequence
MPSAYDDPVY LAQLRRDLLR FARLQLRDAD AAEDAVQEAL TAAWSHAGDF AGLSAHKTWV 
FGILRNKLID VLRARQRTVS LSALDAELDG ESVLDRELFK ENGHWAAHAK PRPWPRPETL
LQQQQFWTLF EACLDHLPEQ IGRVFMMREF LDFEMTDICS ELTLTTNHCS VLLYRARTRL
RTCLSEQGLT TEDAAGEMY