| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A6491 |
|---|
| Symbol | |
|---|
| ID | 3751726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 3659980 |
|---|
| End bp | 3660762 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637764814 |
|---|
| Product | ABC amino acid transporter, periplasmic ligand binding protein |
|---|
| Protein accession | YP_370729 |
|---|
| Protein GI | 78067960 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.353302 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.396985 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCC TTCGCTCCAT CCTGGTCGTC GCCATGCTGC AGGCCGTTTC GGTCACGAGC
GCACTGGCTG CCGACGACCT GTCGCAGATC AAGTCGTCCG GCGTGTTCCG GGTCGGTACC
GAAGGCACAT ATGCGCCGTT CACGTATCAC GACGAAACCG GCAAGCTGAC GGGCTTCGAC
GTCGACATCG CGACCGCGAT CGCGCAGCGC CTCGGCGTGA AGCCGCAGTT CGTCGAAGGC
AAGTGGGACG GGCTGATCGC GGGCCTCGAC GTGAACCGCT ACGACGCGGT CGTCAACGAA
GTGTCGATCA CCGACGCGCG CAAGGCGAAA TACGATTTCT CGACGCCGTA CATCACGTCG
CGCGCGGTGC TGATCGTGCG CGCGGACAAC ACGACGATCC GCTCGTTCGA CGATCTCAAG
GGCAAGAAAT CCGCGAACAC GCTGACCAGC AATTTCGGCA AGCTCGCGGC GTCGCACGGC
GCGGACGTCG TGCCCGTGCA GGGCTTCAAC GAAGCGATCG ACCTGCTGAG CTCGGGGCGC
GTCGACGCGA CGATCAACGA TTCGCTGTCG TACCTCGATT TCCGCAAGCA CAAGCCGGAC
GCGAAGCTGA AGGTCGCGGC GACCGACACC GGCGGCGCGA GCGACGCATC GGGCGTGCTG
CTGCGCAAGG GCAGCCCCGC GCTGGTGGCC GCGGTCGACA AGGCGCTCGC GGACATCAAG
GCGGACGGTA CCTACGCGAA GATCTCGCAC AAGTATTTCG GCCGCGACGT GTCGCAGCCG
TAA
|
|---|
| Protein sequence | MKFLRSILVV AMLQAVSVTS ALAADDLSQI KSSGVFRVGT EGTYAPFTYH DETGKLTGFD
VDIATAIAQR LGVKPQFVEG KWDGLIAGLD VNRYDAVVNE VSITDARKAK YDFSTPYITS
RAVLIVRADN TTIRSFDDLK GKKSANTLTS NFGKLAASHG ADVVPVQGFN EAIDLLSSGR
VDATINDSLS YLDFRKHKPD AKLKVAATDT GGASDASGVL LRKGSPALVA AVDKALADIK
ADGTYAKISH KYFGRDVSQP
|
|---|
| |