Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A6490 |
Symbol | |
ID | 3751725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 3659285 |
End bp | 3659965 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637764813 |
Product | amino acid ABC transporter inner membrane protein |
Protein accession | YP_370728 |
Protein GI | 78067959 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.598296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.622101 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGCCT GGCTTCACCT GATGGCGGAA TCGCTGCGGC CCCTGCTGGT TGCGGGGCTC GTGTTCACGG TGCCGCTCAC GCTCGCGTCG TTCGCGATCG GCCTGCTGCT CGCATTCGGC GCAGCGCTCA CGAGGCTGTT CGGGCCGCGT TGGGCGCAGG CCGCCGTGCG TTTCTACATC TGGCTGTTTC GCGGTTCGCC GCTGCTCGTG CAACTGTTCG TGATCTTCTA CGGCCTGCCG AGCGTCGGCA TCGTGCTCGA TCCGCTGACG GCCGCGGTGA TCGGCTTCTC GCTGAACGTC GGCGCGTACA ACGCCGAGGT GATCCGCGGC GTGATCGAAT CGATTCCGAA GGGGCAGTGG GAGGCCGCGT ACTCGATGGC GATGACGCGC CCGCAGGCGC TGCGCCGCGC GATCCTGCCG CAGGCCGCGC GCGTCGCGCT GCCCGCACTG TCGAATTCGT TCATTTCGCT CGTGAAGGAC ACGTCGCTCG CGGCCGTGCT GACCGTGCCG GAGATCTTCC AGGCCGCGCA GCGGATCGCA GCCGTGACCT ACGAGCCGAT GATTCTCTAT ACGGAAGCCG CGCTGATCTA TCTGCTGCTC AGCTCGGTGC TGTCCACGCT GCAGCGTCGC CTCGAAATCC GCTTCGGCCG CCATGCGCTG TTCCAGGCGG AGTTGCGATG A
|
Protein sequence | MPAWLHLMAE SLRPLLVAGL VFTVPLTLAS FAIGLLLAFG AALTRLFGPR WAQAAVRFYI WLFRGSPLLV QLFVIFYGLP SVGIVLDPLT AAVIGFSLNV GAYNAEVIRG VIESIPKGQW EAAYSMAMTR PQALRRAILP QAARVALPAL SNSFISLVKD TSLAAVLTVP EIFQAAQRIA AVTYEPMILY TEAALIYLLL SSVLSTLQRR LEIRFGRHAL FQAELR
|
| |