| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A6317 |
|---|
| Symbol | |
|---|
| ID | 3751550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 3481919 |
|---|
| End bp | 3482995 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637764638 |
|---|
| Product | outer membrane protein, (porin) |
|---|
| Protein accession | YP_370555 |
|---|
| Protein GI | 78067786 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAT TCGCTCGCCG TGCGTCGCGC ACGTCCGTCA AGCTGATCGC CGCGGCTGCC
TGCGTGGCGG CTACCGCTCC CGTCCATGCA CAGTCGAGCG TGTCGCTCTA CGGTCAGGTC
GACGAATGGG TCGGCGCAAC CAAGTTCCCG GGCGGAGACC GCGCGTGGAA CGTGAGCGGC
GGCGGGATGT CGACGTCGTA CTGGGGTTTG CACGGCGCCG AGGATCTCGG CAACGGCTAC
AAGGCGATCT TCACGCTGGA AAGCTTCTTC CGCGCGCAGA ACGGCCAGTT CGGCCGCTTC
CAGGGTGACA CGTTCTTCGC ACGCAACGCA TACGTCGGCA TCGATTCGCC GTACGGCACG
GTGACGGCCG GCCGCCTGAC GACGCACCTG TTCCTGTCGA CGATCCTGTT CAACCCGTTC
TACGACTCGT ACACCTTCTC GCCGATGGTG TACCACGTGT TCCTCGGCCT CGGCACGTTC
CCGACCTACC CGAGCGACCA GGGTGCCGTC GGCGATTCGG GCTGGAACAA CGCGCTGTCG
TACACGTCGC CGTCGTTCGG TGGCCTGAAT TTCGGCGCGA TGTACGCGCT CGGCAACCAG
GCCGGCGACA ACGGCTCGAA GAAGTGGAGC GCGCAGTTCA ACTATGCGAA CGGCCCGTTC
GCGGCGACCG CGGTCTACCA GTACGTGAAC TTCAACAACG GCCCGCGCGA CCTGAGCGCG
CTGGTGGCCG GCATGAAGAG CCAGGGCATC GCGCAAGTCG GCGCGACCTA CGACCTGAAG
TACGTGAAGC TGTTCGGCCA GTACATGTAT ACGAAGAATG ACCAGGTCGC GGGCAGCTGG
CACGTGAATA CCGCGCAGGG CGGCGTGTCG GTGCCGCTCG GCGTCGGCAA CGCGATGGCG
TCGTACGCGT ACTCGCGCGA TTCGGGCGGC CTCGACCAGA CGCGCCAGAC CTGGGCCGTC
GGCTACGACT ATCCGCTGTC CAAGCGCACG GACGTCTACG CTGCGTACAT GAACGACCAC
ATCAGCGGCC TGTCGACCGG CAACACGTTC GGCGCCGGCA TCCGCGCGAA GTTCTGA
|
|---|
| Protein sequence | MKAFARRASR TSVKLIAAAA CVAATAPVHA QSSVSLYGQV DEWVGATKFP GGDRAWNVSG
GGMSTSYWGL HGAEDLGNGY KAIFTLESFF RAQNGQFGRF QGDTFFARNA YVGIDSPYGT
VTAGRLTTHL FLSTILFNPF YDSYTFSPMV YHVFLGLGTF PTYPSDQGAV GDSGWNNALS
YTSPSFGGLN FGAMYALGNQ AGDNGSKKWS AQFNYANGPF AATAVYQYVN FNNGPRDLSA
LVAGMKSQGI AQVGATYDLK YVKLFGQYMY TKNDQVAGSW HVNTAQGGVS VPLGVGNAMA
SYAYSRDSGG LDQTRQTWAV GYDYPLSKRT DVYAAYMNDH ISGLSTGNTF GAGIRAKF
|
|---|
| |