Gene Bcep18194_A6260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A6260 
Symbol 
ID3751493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp3417757 
End bp3420462 
Gene Length2706 bp 
Protein Length901 aa 
Translation table11 
GC content65% 
IMG OID637764581 
Productmethionine synthase (B12-dependent) 
Protein accessionYP_370498 
Protein GI78067729 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1410] Methionine synthase I, cobalamin-binding domain 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCC TCGCCGGCCT CGAGCCGTTC AACGTCACGC CCGGGACGCT CTTCATCAAC 
GTCGGTGAAC GCACCAACGT CACCGGCTCG AAGGCGTTCG CACGCATGAT CCTCAACGGC
CAGTTCGACG AGGCTCTCGC GGTCGCGCGC CAGCAGGTCG AGAACGGCGC GCAGGTGATC
GACATCAACA TGGACGAGGC GATGCTCGAT TCGAAGGCGG CGATGGTGCG CTTCCTGAAC
CTGATCGCAT CGGAGCCGGA CATCGCGCGC GTGCCGATCA TGATCGACTC GTCAAAGTGG
GAAGTGATCG AGGCGGGCCT GAAGTGCGTG CAGGGCAAGG CGATCGTGAA CTCGATCTCG
CTGAAGGAAG GCGAGGACGC GTTCCGCCAC CACGCGCACC TGATCCGCCG CTACGGCGCG
GCGGCCGTCG TGATGGCGTT CGACGAAACC GGCCAGGCCG ATACCTACGA GCGCAAGATC
GAGATCTGCA CGCGCTCGTA CAACTTCCTC GTGAACGAAG TCGGCTTCCC GCCGGAAGAC
ATCATCTTCG ACCCGAACAT CTTCGCGATC GCGACCGGCA TCGAGGAGCA CAACAACTAC
GCGGTCGACT TCATCGAGGC GACCCGCTGG ATCAAGCAAA ACCTGCCGCA CGCGAAGATC
AGCGGCGGCG TGTCGAACGT GTCGTTCTCG TTCCGCGGCA ACGACCCGGT GCGCGAGGCG
ATCCACACCG TGTTCCTGTA CCACGCGATC CAGGCGGGGA TGGACATGGG CATCGTCAAC
GCGGGCCAGC TCGGCGTGTA CGCCGACCTC GACCCGGAGC TGCGCGAGCG CGTCGAGGAC
GTGATCCTGA ACCGCCGCGA CGATTCGACC GACCGCCTGC TCGAAATCGC CGACAAGTTC
AAGGCGGGCG GCGCGAAGAA GGAAGAGAAC CTCGAGTGGC GCAACCAGCC GGTCGAGAAG
CGGCTCTCGC ATGCACTGGT GCACGGCATC ACGAACTTCA TCGTCGAGGA TACCGAGGAA
GTGCGCGCGA AGATCGACGC GGCCGGCGGC CGCCCGATCA ACGTGATCGA AGGGCCGCTG
ATGGACGGGA TGAACATCGT CGGCGACCTG TTCGGCCAGG GCAAGATGTT CCTGCCGCAG
GTCGTGAAAT CGGCGCGCGT GATGAAGCAG GCCGTCGCGC ACCTGATTCC GTTCATCGAG
GAAGAAAAGC GCCTGCTCGC GGAAGCGGGC GGCGACGTGC GCGCGAAGGG CAAGATCGTC
ATCGCGACCG TGAAGGGCGA CGTGCACGAC ATCGGCAAGA ACATCGTGTC GGTCGTGCTC
CAGTGCAACA ACTTCGAAGT CGTCAACATG GGCGTGATGG TCCCGTGCAA CGAGATCCTC
GCGAAGGCGA AGGTCGAGGG CGCGGACATC ATCGGGCTGT CGGGCCTCAT CACGCCGAGC
CTCGAGGAAA TGGCGTACGT CGCGTCCGAA ATGCAGCGCG ACGACTACTT CCGCGTGAAG
AAGATTCCGC TGCTGATCGG CGGCGCGACG ACCTCGCGCG TGCACACGGC CGTGAAGATC
GCGCCGCACT ACGAAGGCCC GGTGGTCTAC GTGCCGGACG CGTCGCGCTC GGTATCGGTC
GCCTCCAGCC TGCTGTCCGA CGAAGGCGCG ACGAAGTACC TCGACGAGCT GAAGTCCGAC
TACGAACGCA TCCGCGACCA GCACGCGAAC CGCAAGGCGC AGCCGATGGT CACGCTCGCC
GAAGCGCGCG CGAACAAGAC CAAGGTCGAC TGGGCGGGCT ACCAGCCGGT GAAGCCGAAG
TTCATCGGCC GCCGCGTGTT CAAGAACTAC GACCTGAACG AGCTCGCGCA GTACATCGAC
TGGGGCCCGT TCTTCCAGAC CTGGGATCTC GCGGGCCCGT ACCCTGCGAT CCTGAACGAC
GAGATCGTCG GCGAATCGGC GCGGCGCGTG TTTTCCGACG CAAAATCGAT GCTCGCGCGC
CTGATCCAGG GCCGCTGGCT GACCGCGAGC GGCGTGATCT CGCTGCTGCC GGCGAATACC
GTCAACGGCG ACGACATCGA GATCTACAGC GACGAGTCGC GCTCGGAAGT GCTGCTCACG
TGGCGCAACC TGCGCCAGCA GAGCGTGCGC CCGGTGGTCG ACGGCGTAAT GCGGCCGAAC
CGCTCGCTCG CCGACTTCAT CGCGCCGAAG GAATCGGGCG TCGCCGACTA CATCGGGATG
TTCGCGGTGA CGGCCGGCCT CGGCGTCGAC GTGAAGGAAA AGCAGTTCGA AGCCGACCAC
GACGACTACA GCGCGATCAT GCTGAAGGCG CTCGCCGACC GCTTCGCGGA AGCCTTCGCG
GAAGCGATGC ATGCGCGCGT GCGGCGCGAG CTGTGGGGCT ACGCGAGCGG CGAAACGCTC
GACAACGATG CGCTGATCGC CGAAAAGTAC GCGGGCATCC GCCCGGCGCC CGGCTACCCG
GCCTGCCCCG ACCACCTCGT GAAGCGCGAC ATGTTCGACG TGCTGCGCGC GGACGAGATC
GGCATGAGCG TGACCGATTC GCTGGCGATG CTGCCGGCCG CGAGCGTGTC GGGCTTCTAT
CTCGCGCATC CGGACAGCAC GTACTTCTCG GTCGGCAAGA TCGGGCAGGA TCAGCTCGAG
GACTATGCGC AGCGCATGGC GCTGTCGCTC GACGACGCGC GCCGCGCGCT TGCGCCGCAG
CTGTAA
 
Protein sequence
MMRLAGLEPF NVTPGTLFIN VGERTNVTGS KAFARMILNG QFDEALAVAR QQVENGAQVI 
DINMDEAMLD SKAAMVRFLN LIASEPDIAR VPIMIDSSKW EVIEAGLKCV QGKAIVNSIS
LKEGEDAFRH HAHLIRRYGA AAVVMAFDET GQADTYERKI EICTRSYNFL VNEVGFPPED
IIFDPNIFAI ATGIEEHNNY AVDFIEATRW IKQNLPHAKI SGGVSNVSFS FRGNDPVREA
IHTVFLYHAI QAGMDMGIVN AGQLGVYADL DPELRERVED VILNRRDDST DRLLEIADKF
KAGGAKKEEN LEWRNQPVEK RLSHALVHGI TNFIVEDTEE VRAKIDAAGG RPINVIEGPL
MDGMNIVGDL FGQGKMFLPQ VVKSARVMKQ AVAHLIPFIE EEKRLLAEAG GDVRAKGKIV
IATVKGDVHD IGKNIVSVVL QCNNFEVVNM GVMVPCNEIL AKAKVEGADI IGLSGLITPS
LEEMAYVASE MQRDDYFRVK KIPLLIGGAT TSRVHTAVKI APHYEGPVVY VPDASRSVSV
ASSLLSDEGA TKYLDELKSD YERIRDQHAN RKAQPMVTLA EARANKTKVD WAGYQPVKPK
FIGRRVFKNY DLNELAQYID WGPFFQTWDL AGPYPAILND EIVGESARRV FSDAKSMLAR
LIQGRWLTAS GVISLLPANT VNGDDIEIYS DESRSEVLLT WRNLRQQSVR PVVDGVMRPN
RSLADFIAPK ESGVADYIGM FAVTAGLGVD VKEKQFEADH DDYSAIMLKA LADRFAEAFA
EAMHARVRRE LWGYASGETL DNDALIAEKY AGIRPAPGYP ACPDHLVKRD MFDVLRADEI
GMSVTDSLAM LPAASVSGFY LAHPDSTYFS VGKIGQDQLE DYAQRMALSL DDARRALAPQ
L