Gene Bcep18194_A6245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A6245 
Symbol 
ID3751478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp3403575 
End bp3404420 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content76% 
IMG OID637764566 
ProductSel1 repeat-containing protein 
Protein accessionYP_370483 
Protein GI78067714 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.846294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGA TCCGGACGAT GCGGCCGGCC GAAACCGGCC TCGCCGCCGC CGCGCGGCGC 
CTGCTGCGCG CGAAACTCCC GCCGGCCGCG CTGCTCGCGG CGGCGGCCGT GACCGTCGCG
GCCGTCGTCG CGGCAACCGG CCTGCGAGGC GCCGGCCCCG CGCCGAGCGC CGCGCAGCTC
GACGAGTGGC AGGCGATGGT CACGCAGGCC ACCGAGCCGC ACGCGCTCGC GCAGTTGCGC
ACGCTGGCAC GCCGCGGCTC GGGCGACGCG CAGGCGGCGC TCGGCATCGC GCTCGCCGAC
GCGCGCGAAC CGGGGCTGCG CGACGAGGGG CGCGGCTGGC TGGAAACGGC CGCGGCGGCA
GACGGCAAGG CCGACGCGCC GGCTGCCCGG CGTGCGCAGC TCGCGCTCGG CAAGGCGTTG
CTGCTCGGCA GCAGCGACAT GCCGAAGGAC TACGCACGCG CCCGCACGCT GCTCGGCGAA
GCGGCCGCGC AGGACGACCC GGCCGCTGCG TATTACCTCG GGCTGATCTA TCGCAGCGGT
TATGGCGTCG CCGCCGATCC CGTTCAGGCC GCGCACTGGT TCGACGTCGC GTCGCGCGCG
GACATCCCGG CCGCGGACTT CATGCTCGCG AACGCGTACC GGGACGGCAG CGGCGTGCCG
CGCGACGAGG CGCGCGCGCT GGCGCTGTAT CGCCGCGCCG CCGAGCACGA GCTGCCGGAA
GCCGTGCAGA CGCTCGCAAT GGCCTATCGC AACGGCGAGC TCGGGCTCAA GCCCGACGCG
GACGAATTCC ACGCGCAGTG GATCGAGACC GCGCATGCGC TGAAGCACCC GGTCGTCGCG
CCGTAG
 
Protein sequence
MQPIRTMRPA ETGLAAAARR LLRAKLPPAA LLAAAAVTVA AVVAATGLRG AGPAPSAAQL 
DEWQAMVTQA TEPHALAQLR TLARRGSGDA QAALGIALAD AREPGLRDEG RGWLETAAAA
DGKADAPAAR RAQLALGKAL LLGSSDMPKD YARARTLLGE AAAQDDPAAA YYLGLIYRSG
YGVAADPVQA AHWFDVASRA DIPAADFMLA NAYRDGSGVP RDEARALALY RRAAEHELPE
AVQTLAMAYR NGELGLKPDA DEFHAQWIET AHALKHPVVA P