| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A6221 |
|---|
| Symbol | |
|---|
| ID | 3751454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 3377837 |
|---|
| End bp | 3379969 |
|---|
| Gene Length | 2133 bp |
|---|
| Protein Length | 710 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637764542 |
|---|
| Product | 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase |
|---|
| Protein accession | YP_370459 |
|---|
| Protein GI | 78067690 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.368406 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCAC CCGCTTCCCC CACCAGCCCG GCCAGCACCG TCACGCGCGA ACGGCGCGAC
AAGGTGCTCG TCGTCACGAT CGACCATCCG CCCGTCAACG CGCTGTCCGC CGATGTGCGG
CGCGGCCTCG CCGACGCGCT CGACGTTGCG CAGGCCGACG ACGCGATTCG CGCGGTGCTG
ATCGTCGGCG CCGGCCGCAA TTTCATCGCG GGTGCCGACA TCCGCGAATT CGGCAAGCCG
ATCGTGCCGC CGTCGCTGCC CGACGTGTGC GAGCGGATCG AATCGGGCAC GAAGCCGGTC
GTGGTCGCGC TGCACGGCGC GACCCTCGGC GGCGGCCTCG AAGTCGCGCT CGCCGCGCAT
TACCGGCTCG CGGTGCCCGG CGCGAAGCTC GGGCTGCCCG AAGTCACGCT CGGCCTGCTG
CCTGGCGCGG GCGGCACGCA GCGCGCGCCG CGCCTGATCG GTGCGAAGGC CGCACTCGAC
CTGATGCTGA CGGGCCGTCA TGTGAGCGCG GACGAAGCGC TCGCGCTCGG CCTCGTCGAC
CGCGTCGCGC ACAGCGACGA CACGCTCGCC GAGGGCCTCG CCTATGCGCA GGAGCTCGTG
TCGCTCGGCG CACCGGTGCG CCGCACGCGT GATGCGCAGG GGCTCGTCGA CCGCGCGGCC
GCACAGGCCG CGATCGATGC GGCGCGTGCG GAGCTGCCGA AGAAATCGCG CGGCCTGTTC
TCGCCCGCGA AGATCGTCGA CGCGGTCGAG GCCGCGCTCA CGCAGTCGTT CGACGCGGGG
ATGGCGTTCG AGCGCAGCCT GTTCCTGCAG TGCATCGACA GCCCGCAGCG CGCGGGCCTC
GTGCACGCGT TCTTCGCGGA GCGCGAAGCG GCCAAGGCGC CCGAATCGCG GCGCGCGAGC
GCGCGGCCGG TCGAGCGGAT CGGCGTGGTC GGCGGCGGCA CGATGGGCGC GGGTATCGCG
GTCTCGGCGC TCGATGCCGG GCTGCCGGTG ACGATGATCG AACGCGACGA AGCATCGCTC
GCGCGCGGCC GTGCGCACGT CGAGAAGGTA TACGACGGCC TCGTCGCGAA AGGGCGGATG
ACACCGGCCG CGCACGCCGC GCGGCTCGCG CGCTTCAAGG GCGGCACGTC GTACGACGCG
CTCGCGCAGG CCGACGTCGT GATCGAGGCC GTGTTCGAGG ACATGGCCGT GAAGAAGGCC
GTGTTCGCCG AACTCGCGCG CGTGTGCAAG CCGGGCGCGG TGCTTGCGAC CAACACGTCG
TATCTCGACA TCGACGAACT GGCCGCGAGC ATCGACCGGC CGGCCGACGT GATCGGCCTG
CATTTCTTCT CGCCGGCCAA CGTGATGAAG CTGCTCGAGA TCGTCGTGCC GGCGCGCGTG
AGTGCGGACG TCGTCGCGAC CGCGTTCGCG CTCGCGAAGC AGCTGAAGAA GACGCCGGTG
CGCGCGGGCG TGTGCGACGG CTTCATCGGC AACCGGATCC TCGCCGTCTA TCGCACGGCG
GCCGACTACC TGATGGAGGA CGGCGCGTCG CCGTACCAGA TCGATCGTGC GGTGCGCGAG
TTCGGCTTCC CGATGGGGCC GTTCCAGGTC GTCGACCTTG CGGGCGGCGA CATCGGCTGG
GCGACCCGCA AGCGCCGCGC GGCGACGCGC GACCCGCGTG CGCGCTACGT GGAGATTTCC
GACCGGCTGT GCGAGCGCGG CTGGTTCGGC CAGAAGACCG CGCGCGGCTA CTACCTGTAC
CCGGACGGCG CGCGGGTCGG CACGCCGGAC CCGGAAGTCG AGACGATCGT CGCGGAGGAG
CGCGCGAAGA AGGGCGTCAC GCCGCGCACG TTCACCGACG ACGAGATCAT GCGCCGCTAC
CTCGCCGCGA TGATCAACGA AGGCGCGAAC GTCGTGCACG AGAAGATCGC GCTGCGCCCG
CTCGATGTCG ATGCGGTGTT CCTGTACGGC TACGGCTTCC CGCGTTATCG CGGCGGCCCG
ATGCATTACG CGGACACGGT CGGCCTCGCG AACGTGCTCG CCGATATCCG CACGTTCGCG
AAGGAAGATC CGCTGTTCTG GAAGCCGTCG CCGCTGCTCG TCGATCTCGT CGCGCGCGGC
GCGGATTTCG CGAGCCTGAA CCGCATCGAC TGA
|
|---|
| Protein sequence | MNSPASPTSP ASTVTRERRD KVLVVTIDHP PVNALSADVR RGLADALDVA QADDAIRAVL
IVGAGRNFIA GADIREFGKP IVPPSLPDVC ERIESGTKPV VVALHGATLG GGLEVALAAH
YRLAVPGAKL GLPEVTLGLL PGAGGTQRAP RLIGAKAALD LMLTGRHVSA DEALALGLVD
RVAHSDDTLA EGLAYAQELV SLGAPVRRTR DAQGLVDRAA AQAAIDAARA ELPKKSRGLF
SPAKIVDAVE AALTQSFDAG MAFERSLFLQ CIDSPQRAGL VHAFFAEREA AKAPESRRAS
ARPVERIGVV GGGTMGAGIA VSALDAGLPV TMIERDEASL ARGRAHVEKV YDGLVAKGRM
TPAAHAARLA RFKGGTSYDA LAQADVVIEA VFEDMAVKKA VFAELARVCK PGAVLATNTS
YLDIDELAAS IDRPADVIGL HFFSPANVMK LLEIVVPARV SADVVATAFA LAKQLKKTPV
RAGVCDGFIG NRILAVYRTA ADYLMEDGAS PYQIDRAVRE FGFPMGPFQV VDLAGGDIGW
ATRKRRAATR DPRARYVEIS DRLCERGWFG QKTARGYYLY PDGARVGTPD PEVETIVAEE
RAKKGVTPRT FTDDEIMRRY LAAMINEGAN VVHEKIALRP LDVDAVFLYG YGFPRYRGGP
MHYADTVGLA NVLADIRTFA KEDPLFWKPS PLLVDLVARG ADFASLNRID
|
|---|
| |