Gene Bcep18194_A6145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A6145 
Symbol 
ID3751378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp3288356 
End bp3289291 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content65% 
IMG OID637764466 
ProductRNA polymerase factor sigma-32 
Protein accessionYP_370383 
Protein GI78067614 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAACG CCCTGACCCT CCCGAACACC CTGAGCCCGA CGCCGGCCAA GGCCGCATCG 
GCAGGCTCGC TGGCGCTCGC AGCTCAATCG ATGTTGCCGG GCCAGCTTGG CAACATCGAC
GCGTATATCC AGGCCGTCAA TCGCATTCCG CTGCTGACGG TCGAAGAGGA ACGCCAGTAC
GCGACCGAAT TCCGCGAAGG CAACAACCTC GACTCGGCAC GCCGCCTCGT GCTGTCGCAC
CTGCGGCTCG TCGTGTCGAT CTCGCGCAAC TATCTCGGCT ACGGCCTGCC GCACGGCGAC
TTGATCCAGG AAGGCAACAT CGGCCTGATG AAGGCCGTGA AGCGCTTCGA TCCGGCCCAG
AACGTGCGTC TCGTGTCGTA CGCGATCCAC TGGATCAAGG CCGAGATTCA CGAGTACATC
CTGCGCAACT GGCGCACGGT GAAGGTCGCG ACGACGAAGG CGCAGCGCAA GCTGTTCTTC
AACCTGCGCA GCCACAAGAA GGGCCTGCAG GCGATGACGC CCGAGGAAAT CGACGGCCTC
GCGAAGGAAC TCAACGTCAA GCGCGAAGAC GTGACCGAAA TGGAAACGCG CCTGTCGGGC
GGCGACATCG CGCTCGAAGG GCAGGTCGAA GACGGCGAGG AGTCGTACGC GCCGATCGCC
TACCTGGCCG ACTCGCACAA CGAGCCGACC GCCGTGCTCG CCGCGCGTCA GCGCGACACG
CTGCAGACGG ACGGCATCGC GCAAGCACTC GACGCACTCG ACGCGCGCAG CCGCCGCATC
ATCGAGGCGC GCTGGCTGCA CGTCGACGAC GACGGCTCGG GCGGCTCGAC GCTGCACGAT
CTCGCTGCCG AGTTCGGTGT GTCGGCGGAA CGCATCCGCC AGATCGAAGC GAGCGCCATG
AAAAAGATGC GCACTGCCCT CGCCGAATAC GCGTAA
 
Protein sequence
MSNALTLPNT LSPTPAKAAS AGSLALAAQS MLPGQLGNID AYIQAVNRIP LLTVEEERQY 
ATEFREGNNL DSARRLVLSH LRLVVSISRN YLGYGLPHGD LIQEGNIGLM KAVKRFDPAQ
NVRLVSYAIH WIKAEIHEYI LRNWRTVKVA TTKAQRKLFF NLRSHKKGLQ AMTPEEIDGL
AKELNVKRED VTEMETRLSG GDIALEGQVE DGEESYAPIA YLADSHNEPT AVLAARQRDT
LQTDGIAQAL DALDARSRRI IEARWLHVDD DGSGGSTLHD LAAEFGVSAE RIRQIEASAM
KKMRTALAEY A