| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A6129 |
|---|
| Symbol | |
|---|
| ID | 3751361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 3272750 |
|---|
| End bp | 3274573 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637764449 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_370367 |
|---|
| Protein GI | 78067598 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00611296 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGC CCTCGAAGCT GCTTCAGAAG CGCCCCGCCG CCGCGCGCGG CGCGCGCGCC
TTCCCGGTCC GCCGTGCACT CGGCGCCGCG CTGTTTGCCG CCTGGACCCT CACCGCCTTC
CCGGCCCACG CGCAGGATCC GGCATCGGAC GGCGCGGAGT CGCAGGGCGC GTTCGAGCAT
GTGATGCCGG ACGAGAAAAA GGATCTCCCC GGCGTTCCGC TGACGAGCCA GATCGTCTAT
CAGGTGCTCG CCGCCGAGGT CGCGCTGCAG CGTAACCAGC CCGCGCCGGC CTACCAGACC
TACCTCGCGC TCGCTCGCGA CACGCGCGAT CCGCGCATGG CGCAACGTGC GACCGAGATC
GCGCTCGGCG CGCAGAGCCC GGCCGACGCG TTGTCCGCCG CGAACCTGTG GCGCCAGTAC
GCACCGGATT CGAATCGCGC ATCGCAGGTC GACGCCGCGC TGCTGGTGCT TGCCGGCAAG
CCGGCCGACG CGCAGCCGAT GCTCGCGCGC GAGCTGGCCC GGGCGACCGG CGAGACGCGC
GGCCCGGCGA TCCTCGCGCT GCAGGCGTTG CTGGTACGCG GCTCCGACCG CGTCGGCGGC
CTCGCGGTGC TGAAGGACAT GCTGAAGAAC GACCTGAACC GGCCCGAAGC GCAGCTCGCG
ATCGCGCGCC AGCAGCTCGC GGTCGACGAC AAGGACGGCG CCGCGCAGTC GCTGAAGCAG
GCGCTGCAGA TCCGCCCCGA CTACCTGCCG GCGGCCCTGA TGCTGTCGCA GATGGGGCCC
GCGGAACGCG CGGCGGGCAT CGCGTCGTTC GAGAAGTATG TTCAGCAGAA TCCGAAGTCG
CGCGACGCGC GGCTCGCGCT GTCGCAGCTG TATCTCGCCG ACGATCGCCT CGACGACGCG
CAGAAGCAGT TTGAGACGAT GCGCAAGCTC GACTCGAAGG ACCCGACGCC GCTGATGGCG
CTCGCGCTGA TCAAGATCCA GCAGAAGAAG CTCGACGAAG CAACGGTCTT CCTGAAGCAG
TACGTGCAGC TCGGCGACAA GCAGCCGAAC CTCGACGTCG GCCAGGGCTA CATCTACCTC
GCGCAGATCG CGATCGACCA GAACAACGAC GCGCAGGCGT CGCAGTGGCT CGACAAGGTC
GACCAGACGA GCCAGCACTA CCTCCCCGCG CAGATCACGC GCGCGCAGCT GCTGCAGAAA
CAGGGCAAGA CCGACGAGGC GCGCAAGGTG CTCGACGACC TGCCGATCAC GGATCCGCGC
GATGCGGCCG TGGTCGCACG CACCGACGCG TCGATCCTGT TCACCGCGAA GCGCTATCCG
GAAGCCGAGG CACGGCTCGG GCAGGCGGTC CAGGACTTCC CCGACGATCC CGACCTGCGC
TACGACTATG CGATGGCGGC CGAAAAGACC GGCCACTACA CGACGATGGA AAAGCAGCTG
CGCGAGCTGA TCCGCACGCA GCCCGACAAT CCGCAGGCGT ACAACGCACT CGGCTATTCG
CTCGCCGACC GCAACCAGCG GCTGCCCGAA GCCAGCAAGC TGATCGACAA GGCGATGACG
CTCGCGCCGA ACGACGCGTA CATCATGGAC AGCCTCGGCT GGGTGAAGTA CCGGATGGGC
GATACGGCCG GCGCGACGAA GGTGCTGCGA CGCGCGTACG AACTGCAGCC GAACGCCGAA
ATCGGCGCGC ACCTCGGCGA AGTGCTGTGG AAGAGCGGCG CGCAGGACGA CGCGCGTTCC
GCGTGGCGTG ACGCGCAGAA GCTCGAGCCG GACAACGACA CGCTCGTGCA GACGCTGAAA
CGCCTCCAGA TCAACGGTCT CTGA
|
|---|
| Protein sequence | MTLPSKLLQK RPAAARGARA FPVRRALGAA LFAAWTLTAF PAHAQDPASD GAESQGAFEH
VMPDEKKDLP GVPLTSQIVY QVLAAEVALQ RNQPAPAYQT YLALARDTRD PRMAQRATEI
ALGAQSPADA LSAANLWRQY APDSNRASQV DAALLVLAGK PADAQPMLAR ELARATGETR
GPAILALQAL LVRGSDRVGG LAVLKDMLKN DLNRPEAQLA IARQQLAVDD KDGAAQSLKQ
ALQIRPDYLP AALMLSQMGP AERAAGIASF EKYVQQNPKS RDARLALSQL YLADDRLDDA
QKQFETMRKL DSKDPTPLMA LALIKIQQKK LDEATVFLKQ YVQLGDKQPN LDVGQGYIYL
AQIAIDQNND AQASQWLDKV DQTSQHYLPA QITRAQLLQK QGKTDEARKV LDDLPITDPR
DAAVVARTDA SILFTAKRYP EAEARLGQAV QDFPDDPDLR YDYAMAAEKT GHYTTMEKQL
RELIRTQPDN PQAYNALGYS LADRNQRLPE ASKLIDKAMT LAPNDAYIMD SLGWVKYRMG
DTAGATKVLR RAYELQPNAE IGAHLGEVLW KSGAQDDARS AWRDAQKLEP DNDTLVQTLK
RLQINGL
|
|---|
| |