Gene Bcep18194_A6121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A6121 
Symbol 
ID3751353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp3265012 
End bp3266517 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content64% 
IMG OID637764441 
ProductRNA polymerase factor sigma-54 
Protein accessionYP_370359 
Protein GI78067590 
COG category[K] Transcription 
COG ID[COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 
TIGRFAM ID[TIGR02395] RNA polymerase sigma-54 factor 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.592385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA GCCTTCAACT CCGCCTGTCG CAACATCTGG CGCTGACGCC CCAGCTACAG 
CAGTCGATCC GGCTCCTGCA GTTGTCGACG CTCGAATTGC AACAGGAAGT CGCGATGGCC
GTCGCGCAGA ACCCGCTGCT CGAGAACGAC GACGAATGGA TCGCGAGCCC GCTGCGCGTC
GCAGCGGACG GATCGTTGAT CGCGCAGACG CCTCCCGCGC AGAACACCGA ACCCGCTGCG
ACAAACAGCA GCAGTTCGTC GAGCGATCGC GCCGAGCGCG ACGAGCCGGC CGGCGCGGAC
GAATACGACG GTTACGGCTC CGGCGACGGC AACGATGGCC CGCAGTGGAA CCTCGACGAA
TTCGGGCGCT CGAGCGGCGC ATCCGACGAC GACGACCTCC CGCCGCTGCA AGTGCAGGAA
GCGGCGACGT CGCTGCGCGA CCACCTGTCC GCGCAGTTGC GCGTCACGCA GGCGAGCCCG
CGCGATCGCG CGCTCGTGAT GTTCCTGATC GAATCGCTCG ACGACGACGG CTACCTGACG
GCCACGCTCG ACGAAGTGCT CGCCGACCTG CCGCCCGAGC TGGAGATCGA TTGCGACGAA
CTGAACGCGG CGCTCGCGCT GCTGCACAGC TTCGACCCGG CCGGGGTCGG TGCCCGCTCG
GCATCCGAAT GCCTGAAGCT GCAGTTGCTG CGTCTCGATC CGTCCCCGAC ACGCACGCTC
GCGCTCGAGA TCGTGTCGCA GCATCTCGAA CTGCTCGCCG CCCGCGACTT CACGCGGCTG
CGCAAGCACC TGAAGGCGAA CGACGATGCG CTGCGCGACG CGCACACGCT GATCCGTTCG
CTGGAGCCGT TCCCCGGCGC CGCATACGGC AAGGCCGAGG CCGACTACGT CGTGCCCGAC
ATCATGGTGA AGAAGGTCGG CCAGGGATGG CTCGCGGAGC TCAATCCGGA GGTCGTGCCG
CGCCTGCGGA TCAACAACCT CTACGCGAAC ATCCTGCGCA ACAGCCGCGG TGATCCGTCG
GCCGGTTCGC TCAAGCAACA GCTGCAGGAA GCACGCTGGC TGATCAAGAA CATCCAGCAG
CGATTCGACA CGATCCTGCG TGTCGCGCAG GCCATTGTCG AGCGTCAAAA GAACTTCTTT
GCGCACGGTG AAATTGCCAT GCGCCCCTTG GTTTTGCGGG AAATAGCTGA TACGCTGGGC
CTACACGAGT CGACTGTCAG CCGTGTGACA ACCGGGAAGT ACATGCTGAC CCCGTTCGGG
ACGCTTGAAT TTAAGTACTT CTTCGGATCT CACGTCTCGA CCGACACCGG TGGCGCCGCT
TCGTCGACGG CCATCCGAGC CCTCATCAAG CAACTGATAG GAGCTGAAGA CCCTAAATCG
CCACTTTCGG ACAGCCGCAT TGCCGAGCTG CTGGCAGAAC AAGGATTCGT GGTCGCGCGC
CGCACGGTTG CGAAGTATCG CGAAGCCCTC AAGATCCCGG CAGTGAATCT GCGCAAGTCT
CTTTAA
 
Protein sequence
MKASLQLRLS QHLALTPQLQ QSIRLLQLST LELQQEVAMA VAQNPLLEND DEWIASPLRV 
AADGSLIAQT PPAQNTEPAA TNSSSSSSDR AERDEPAGAD EYDGYGSGDG NDGPQWNLDE
FGRSSGASDD DDLPPLQVQE AATSLRDHLS AQLRVTQASP RDRALVMFLI ESLDDDGYLT
ATLDEVLADL PPELEIDCDE LNAALALLHS FDPAGVGARS ASECLKLQLL RLDPSPTRTL
ALEIVSQHLE LLAARDFTRL RKHLKANDDA LRDAHTLIRS LEPFPGAAYG KAEADYVVPD
IMVKKVGQGW LAELNPEVVP RLRINNLYAN ILRNSRGDPS AGSLKQQLQE ARWLIKNIQQ
RFDTILRVAQ AIVERQKNFF AHGEIAMRPL VLREIADTLG LHESTVSRVT TGKYMLTPFG
TLEFKYFFGS HVSTDTGGAA SSTAIRALIK QLIGAEDPKS PLSDSRIAEL LAEQGFVVAR
RTVAKYREAL KIPAVNLRKS L