Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A6121 |
Symbol | |
ID | 3751353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | + |
Start bp | 3265012 |
End bp | 3266517 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637764441 |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_370359 |
Protein GI | 78067590 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.592385 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCA GCCTTCAACT CCGCCTGTCG CAACATCTGG CGCTGACGCC CCAGCTACAG CAGTCGATCC GGCTCCTGCA GTTGTCGACG CTCGAATTGC AACAGGAAGT CGCGATGGCC GTCGCGCAGA ACCCGCTGCT CGAGAACGAC GACGAATGGA TCGCGAGCCC GCTGCGCGTC GCAGCGGACG GATCGTTGAT CGCGCAGACG CCTCCCGCGC AGAACACCGA ACCCGCTGCG ACAAACAGCA GCAGTTCGTC GAGCGATCGC GCCGAGCGCG ACGAGCCGGC CGGCGCGGAC GAATACGACG GTTACGGCTC CGGCGACGGC AACGATGGCC CGCAGTGGAA CCTCGACGAA TTCGGGCGCT CGAGCGGCGC ATCCGACGAC GACGACCTCC CGCCGCTGCA AGTGCAGGAA GCGGCGACGT CGCTGCGCGA CCACCTGTCC GCGCAGTTGC GCGTCACGCA GGCGAGCCCG CGCGATCGCG CGCTCGTGAT GTTCCTGATC GAATCGCTCG ACGACGACGG CTACCTGACG GCCACGCTCG ACGAAGTGCT CGCCGACCTG CCGCCCGAGC TGGAGATCGA TTGCGACGAA CTGAACGCGG CGCTCGCGCT GCTGCACAGC TTCGACCCGG CCGGGGTCGG TGCCCGCTCG GCATCCGAAT GCCTGAAGCT GCAGTTGCTG CGTCTCGATC CGTCCCCGAC ACGCACGCTC GCGCTCGAGA TCGTGTCGCA GCATCTCGAA CTGCTCGCCG CCCGCGACTT CACGCGGCTG CGCAAGCACC TGAAGGCGAA CGACGATGCG CTGCGCGACG CGCACACGCT GATCCGTTCG CTGGAGCCGT TCCCCGGCGC CGCATACGGC AAGGCCGAGG CCGACTACGT CGTGCCCGAC ATCATGGTGA AGAAGGTCGG CCAGGGATGG CTCGCGGAGC TCAATCCGGA GGTCGTGCCG CGCCTGCGGA TCAACAACCT CTACGCGAAC ATCCTGCGCA ACAGCCGCGG TGATCCGTCG GCCGGTTCGC TCAAGCAACA GCTGCAGGAA GCACGCTGGC TGATCAAGAA CATCCAGCAG CGATTCGACA CGATCCTGCG TGTCGCGCAG GCCATTGTCG AGCGTCAAAA GAACTTCTTT GCGCACGGTG AAATTGCCAT GCGCCCCTTG GTTTTGCGGG AAATAGCTGA TACGCTGGGC CTACACGAGT CGACTGTCAG CCGTGTGACA ACCGGGAAGT ACATGCTGAC CCCGTTCGGG ACGCTTGAAT TTAAGTACTT CTTCGGATCT CACGTCTCGA CCGACACCGG TGGCGCCGCT TCGTCGACGG CCATCCGAGC CCTCATCAAG CAACTGATAG GAGCTGAAGA CCCTAAATCG CCACTTTCGG ACAGCCGCAT TGCCGAGCTG CTGGCAGAAC AAGGATTCGT GGTCGCGCGC CGCACGGTTG CGAAGTATCG CGAAGCCCTC AAGATCCCGG CAGTGAATCT GCGCAAGTCT CTTTAA
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Protein sequence | MKASLQLRLS QHLALTPQLQ QSIRLLQLST LELQQEVAMA VAQNPLLEND DEWIASPLRV AADGSLIAQT PPAQNTEPAA TNSSSSSSDR AERDEPAGAD EYDGYGSGDG NDGPQWNLDE FGRSSGASDD DDLPPLQVQE AATSLRDHLS AQLRVTQASP RDRALVMFLI ESLDDDGYLT ATLDEVLADL PPELEIDCDE LNAALALLHS FDPAGVGARS ASECLKLQLL RLDPSPTRTL ALEIVSQHLE LLAARDFTRL RKHLKANDDA LRDAHTLIRS LEPFPGAAYG KAEADYVVPD IMVKKVGQGW LAELNPEVVP RLRINNLYAN ILRNSRGDPS AGSLKQQLQE ARWLIKNIQQ RFDTILRVAQ AIVERQKNFF AHGEIAMRPL VLREIADTLG LHESTVSRVT TGKYMLTPFG TLEFKYFFGS HVSTDTGGAA SSTAIRALIK QLIGAEDPKS PLSDSRIAEL LAEQGFVVAR RTVAKYREAL KIPAVNLRKS L
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