| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A6109 |
|---|
| Symbol | |
|---|
| ID | 3751341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 3251658 |
|---|
| End bp | 3254543 |
|---|
| Gene Length | 2886 bp |
|---|
| Protein Length | 961 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637764429 |
|---|
| Product | excinuclease ABC subunit A |
|---|
| Protein accession | YP_370347 |
|---|
| Protein GI | 78067578 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0178] Excinuclease ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.547092 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAGA TCCGCATCCG TGGGGCTCGT ACCCACAACC TGAAAAACGT CAATCTCGAC
CTGCCGCGCC ACAAGCTGAT CGTGATTACC GGGTTGTCCG GGTCGGGCAA GTCGTCGCTC
GCGTTCGATA CCCTTTATGC CGAGGGCCAG CGCCGCTACG TCGAAAGCCT GTCCGCGTAT
GCCCGCCAGT TCCTGCAGCT GATGGAGAAA CCCGACGTCG ACCTGATCGA AGGCCTGTCG
CCGGCGATCT CGATCGAGCA GAAGGCGACG TCCCACAACC CGCGTTCGAC CGTCGGCACG
GTCACGGAAA TCCACGACTA CCTGCGACTT TTGTTCGCAC GTGTCGGGAC GCCGTACTGC
CCCGACCACG ACATCCCGCT GGAAGCGCAG AGCGTGTCGC AGATGGTCGA CGCGGCGCTC
GCGCTGCCCG AGGAAACCAA GCTGATGATC CTCGCGCCCG TCGTCGCCGA TCGCAAGGGC
GAGCATGCCG AGCTGTTCGA GGACATGCAG GCGCAGGGTT TCGTGCGCTT TCGCGTGCGC
TCGGGCGGCG GCGCCGCGAA CGAAGGCGTC GCGAAGATCT ACGAGGTCGA GTCGCTGCCG
AAGCTGAAGA AGAACGACAA GCACACGATC GACGTCGTCG TCGACCGCCT GAAGGTGCGC
CCGGACATGA AGCAGCGCCT CGCCGAATCG TTCGAGACGG CACTGCGCCT CGCCGACGGC
CGCGCGATCG CGCTCGAAAT GGAGTCCGAC CGCGAGTACC TGTTCAGCTC GAAGTTCGCG
TGCCCGATCT GCTCGTACTC GCTGCAGGAG CTTGAGCCGC GCCTGTTCTC GTTCAACAAC
CCGATGGGCG CGTGCCCGGA ATGCGACGGC CTCGGCCAGA TCACGTTCTT CGACCCGAAG
CGGGTCGTCG CGCACCCGTC GCTGTCGCTC GCCGCCGGCG CCGTGAAAGG CTGGGACCGC
CGCAACCAGT TCTACTTCCA GATGCTGCAG AGTCTCGCGG CGTTCTACGA ATTCGACATC
GACGCCGCAT TCGAGGATCT GCCGGAAAAG ATCCGCAAGG TGCTGCTGTT CGGCTCGGGC
AAGCAGACGA TCCCGTTCTC GTACATCAAC GAGCGCGGCC GCACGACGAT CCGCGAGCAC
GTGTTCGAAG GGATCATCCC GAACCTCGAG CGCCGCTACC GCGAGACCGA TTCGGTCGCG
GTGCGAGAAG AGCTGTCGAA GTACCAGAAC AACCAGCCGT GCCCGTCCTG CGACGGCACG
CGCCTGCGCC GCGAAGCGCG CCACGTGCGG ATCGGCACGG GCGACTACGC GCGCGGCATC
TTTGAAATCA GCGGCTGGCC GCTGCGCGAC GCGCTCGGCT ATTTCGACGG CCTGTCGCTC
GAAGGCGCGA AGCGCGAGAT CGCCGACAAG GTGATCAAGG AAATCGTCGC GCGCCTTACC
TTCCTGAACA ACGTCGGCCT CGACTACCTG TCGCTCGAGC GCAGCGCCGA AACCCTGTCG
GGCGGCGAGG CGCAGCGCAT CCGGCTCGCG TCGCAGATCG GCTCGGGCCT CACGGGCGTG
ATGTACGTGC TCGACGAGCC GTCGATCGGC CTGCACCAGC GCGACAACGA CCGCCTGATC
TCGACCCTCA AGCATCTGCG CGACCTCGGC AACTCGGTGA TCGTCGTCGA GCACGACGAG
GACATGATCC GCACGGCCGA CTACGTCGTC GACATGGGCC CGGGCGCCGG CGAGCACGGC
GGCGTGATCG TGGCCGAAGG CACGCCGAAG CAGGTGCAGT CGAACCCGCA GTCGCTCACC
GGCCAGTACC TGGTCGGCAA GCGCACGATC GAGTACCCGG ACGAGCGGCT TGCCCCCGAT
CCCGAGCGGA TGCTGCGCAT CGTCGACGCG CACGGCAACA ACCTGAAGCA TGTCGATCTC
GAGCTGCCGG TCGGCCTGCT GACCTGCATC ACCGGTGTGT CGGGCTCCGG CAAGTCGACG
CTGATCAACG ACACGCTGTA TCACGCGGTC GCGCGCCACC TGTACGGTTC GTCGGCCGAG
CCGGCGCCGC ACGAGGCGAT CGAGGGCCTC GAGCACTTCG ACAAGGTGAT CAACGTCGAC
CAGTCGCCGA TCGGCCGCAC GCCGCGCTCG AACCCGGCCA CCTACACGGG CCTGTTCACG
CCGATCCGCG AGCTGTTCTC GGGCGTGCCG ACCTCGAAGG AGCGCGGCTA CGATCCGGGC
CGCTTCTCGT TCAACGTGAA GGGCGGCCGC TGCGAATCGT GCCAGGGCGA CGGCGTGCTG
AAGGTCGAGA TGCACTTCCT GCCGGACGTC TACGTGCCGT GCGACGTGTG CCACGGCAAG
CGCTACAACC GCGAAACGCT CGAAGTGCAG TACAAGGGCA AGAACATCAG CGAAGTGCTC
GACATGACCG TCGAGCATGC GTACGCGTTC TTCAGCGCGG TGCCGGTCAT CGCGCGCAAG
CTGAAGACGC TGCTCGACGT CGGTCTCGGC TACATCCGCC TCGGCCAGTC GGCCACGACG
CTGTCGGGCG GCGAGGCGCA GCGCGTGAAG CTGTCGCTCG AACTCTCCAA GCGCGACACC
GGCCGCACGC TGTACATCCT CGACGAGCCG ACCACCGGCC TGCACTTCCA CGACATCGCA
CTGCTGCTGG AAGTGATCCA CCGGCTGCGC GACCAGGGCA ACACGGTCGT GATCATCGAG
CACAACCTCG ACGTGATCAA GACGGCCGAC TGGGTGATCG ACCTCGGCCC CGAAGGCGGT
GCCGGCGGCG GCCAGATCAT CGCGCAGGGC ACGCCCGAGC AGGTCGCGAA GACGAAGGCG
AGCTTCACCG GCAAGTACCT CGCGCCGCTG CTCAAGCGCA CGACCCGCAA GGTCGCGGCC
GGCTGA
|
|---|
| Protein sequence | MEQIRIRGAR THNLKNVNLD LPRHKLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY
ARQFLQLMEK PDVDLIEGLS PAISIEQKAT SHNPRSTVGT VTEIHDYLRL LFARVGTPYC
PDHDIPLEAQ SVSQMVDAAL ALPEETKLMI LAPVVADRKG EHAELFEDMQ AQGFVRFRVR
SGGGAANEGV AKIYEVESLP KLKKNDKHTI DVVVDRLKVR PDMKQRLAES FETALRLADG
RAIALEMESD REYLFSSKFA CPICSYSLQE LEPRLFSFNN PMGACPECDG LGQITFFDPK
RVVAHPSLSL AAGAVKGWDR RNQFYFQMLQ SLAAFYEFDI DAAFEDLPEK IRKVLLFGSG
KQTIPFSYIN ERGRTTIREH VFEGIIPNLE RRYRETDSVA VREELSKYQN NQPCPSCDGT
RLRREARHVR IGTGDYARGI FEISGWPLRD ALGYFDGLSL EGAKREIADK VIKEIVARLT
FLNNVGLDYL SLERSAETLS GGEAQRIRLA SQIGSGLTGV MYVLDEPSIG LHQRDNDRLI
STLKHLRDLG NSVIVVEHDE DMIRTADYVV DMGPGAGEHG GVIVAEGTPK QVQSNPQSLT
GQYLVGKRTI EYPDERLAPD PERMLRIVDA HGNNLKHVDL ELPVGLLTCI TGVSGSGKST
LINDTLYHAV ARHLYGSSAE PAPHEAIEGL EHFDKVINVD QSPIGRTPRS NPATYTGLFT
PIRELFSGVP TSKERGYDPG RFSFNVKGGR CESCQGDGVL KVEMHFLPDV YVPCDVCHGK
RYNRETLEVQ YKGKNISEVL DMTVEHAYAF FSAVPVIARK LKTLLDVGLG YIRLGQSATT
LSGGEAQRVK LSLELSKRDT GRTLYILDEP TTGLHFHDIA LLLEVIHRLR DQGNTVVIIE
HNLDVIKTAD WVIDLGPEGG AGGGQIIAQG TPEQVAKTKA SFTGKYLAPL LKRTTRKVAA
G
|
|---|
| |