| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5990 |
|---|
| Symbol | |
|---|
| ID | 3751222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 3122054 |
|---|
| End bp | 3125161 |
|---|
| Gene Length | 3108 bp |
|---|
| Protein Length | 1035 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637764310 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_370228 |
|---|
| Protein GI | 78067459 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.101063 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGGC CGCTGAATCG TATCCTGCCG CGCGTGACCG GTCCCGCATC GGTCTGGACG
TGGGTCAAGT GGTCTTTGCT GGCCGCGCTG CTGATCGCCG TGGCGATCGT TGCGCGACTC
GTGCAGAGCG AGATCGAAAC GTCCCGGCTG CAGGCGCATT ACCTGTCCGA GCTCACCCGC
GACGTCGGCT ATACGGTCGA GACGGGCCCG AGCGATCACA TCCGCTTCCC CGCGAACGGC
CCGTACGACC AGCGCCTCGG CTACTCGATG ATCCCGGGGT TCCAGGAGCG GCTGCTCGCG
CGCGGCTTCG TCGTCAGCAA GCAGGCGCGC GATTCGCAGC GGATGCTGTC GCTCGGCGAG
CGCGGGCTGT TCCTCCCGTT CGAAGAGAAG GACCAGGCGG GCCTGATGCT GTTCGACTCG
ACCGGCGCGC CGCTGTTCGC GACCGTGTTC CCGCAGCGCG TCTACCCCGA CTTCGACATG
GTGCCGCGCG TGGTCGCCGA TTCGCTGCTG TTCATCGAGG ATCGCTACCT GCTCGACGCG
AACGAGCCGA ACCGCAACCC GGCGATCGAC TGGGGGCGCT TCAGCCGCGC GGTCGCCGAT
CAGGCACTGC ACGTCGTCAA CCGCCATCAG GCACGCCCGG GCGGCAGCAC GCTCGCGACC
CAGATCGAGA AATTCCGCCA TTCGCCCGAG GGCCGCACCG CGACGCCGCC CGAGAAGCTG
CGGCAGATCG CGTCCGCGTC GGTGCGCGCG TACCTGAACG GCCCGCAGAC GATGCTCGCG
CGCCGCACCA TCGTCGTGCG CTACCTGAAC TCGGTACCGC TCGCCGCACG GCCGCATATC
GGCGAGATAA CCGGCATCGG CGACGGTCTC GCCGCATGGT ACGGCCGCGA CTTCAACGAC
GTGAACCGCA TCCTGTCCGC GCCGACGACC GGCGACAACG TCGACGAACA GGGCAAGACG
TTCCGCGAGG TGCTGTCGCT GATCATCGCG CAGCGCGCAC CGTCGTACTT CCTCAACCGC
GGCTATCCGG CGCTGCAGAA GCTGACCGAC AGCTACCTGC GGCTGTTGTC GAACGGCGGC
GTGATCTCGC CCGCGCTGCG CGACGCCGCG CTGGCCGCGG AGATCGAACG CAGCGCGCCG
CCGGCCGCCG CGCACGTGCA GTCGTTCGTG TCGCGCAAGG CCGTGACGTC CGCGCGCGCG
TCGCTGCTGT CGGCGCTCGG CATCAGCGAC CTGTACCAGC TCGACCAGTT CGACCTGCAG
GCGACCAGCA CGCTCGACAA CGGCGTGCAG CAGGCGGTCG CCGAACGTCT CGCCCAGGCC
TCGACGCGCG ACGGGGCGCA GAAAGCCGGC CTGTACGGCT TCGAGATGCT CGCGCCGAAG
GACGACCCGT CGCACCTCAC GTACAGCTTC ACGCTGTACG AACACCGCAA CGGCGCGAAC
CTGCTGCGCG TGCAGACCGA CAGCGTGAAC GAGCCGTTCG ACGTCAATCG CGGCGGCCGC
ATCAACCTCG GCTCGACCGC GAAACTGCGT ACGCTGATCA CCTACCTGCA GATCGTGTCC
GACCTGCATG CGCGCTACGC GAACCTGTCG AACGCGGAGC TGGCGCGCGT GAAGCCCGAC
CCGATCGACG GGCTGTCGCA CTGGGCGCTC GACTACCTGT CGCATACGCG CGACCGCTCG
CTGCAGGCGA TGCTCGACGC GGCCGTCGAA CGCAAGTATT CGGCGAGCCC CGACGTGTTC
TACACGGGCG GCGGCGCGCA GGTGTTCTCG AACTTCGAGA AGTCGGACAA CGGCCGCATC
CTGACGCTGC ACACGGCGTT CGAGCATTCG GTCAACCTCG TGTTCGTGCG GCTGATGCGC
GACATCGTCC ACTACGAGAC GCTGCAGGCG GCCGGCCCGT CGTCATCGTG GCTCGGAGAC
CCCGAGCAGC GCCAGCATTA CCTGCAGCAG TTCGTCGACG GCGAAAGCCA GGTCTACGTG
AAGCGCTACT ACACGCGCTA TGCGGGCAAG GCGCCCGACG ACGCGCTCGC GTTGATGCTG
AAGGACGTGC GCAAATCGCC GCCGAAGATC GCGACGGTGC TGCGCAGCGT CGCACCGAAC
GAATCGCTCG CATGGTTCGA CGCGCAGATG CGCGTGCAGC TGAAGGGCAC GCCGGCCGCG
ACGCTGTCCG ACGACGATCT CGCCAAGCTC TACGCGAAGT ACGCGATCGA CCGCTTCAAC
CTCAACGATC GCGGCTATAT CGCGAGCGTC CATCCGCTCG CGCTGTGGAC GCTCAACTAC
CTGCGCGCGC ACCCGGCGGC GTCGCTCGCC GACGTCCAGC GCGACAGCCA CGATGCACGT
TTCTACACGT ACTCGTGGCT GTACAAGACG CGCTACCACG CGACCCAGGA CCGCCGCATC
CGCCGCATGG TCGAGCTGCG TGCGTATGCT GAAATCACGA AGTCGTGGCG TGCGCTCGGC
TACCCGTTCG CGGAAGTCAC GCCGTCGTAC GCGGCCGCGA TCGGCGCATC GGGCGACCAG
CCCGACGCAC TCGCGAAACT GATCGGCCTG ATCGCGAACG GCGGCCAGAA GGCGCCGACC
GAGACGATCA CGCGACTCGA CTTCGCGAAG GGCACACCGT ACGAAACGCG CTTCGTGCGC
GCGGTCGCCC AGCCGCAGCC GATGCTGTCG CCGGAGATCG TCAACGTGGC GCACACGCTG
CTGCGCGACG TCGTGCTCAA CGGCACCGCG CGCCGTCTCG CGGGCGGCTT CACGCTGCCC
GACGGCAAGA CGCTCGACGT GTACGGCAAG ACGGGGACGG GCGACCAGCG CTTCAACGTC
TATGCGCGCG GCGCGCGGCT GATCGAGTCG CGCAAGGTGA ACCGCAGCGG CACCTTCGTG
TTCGTGCTCG GCGACCGGTT CTTCGGGGTC CTGACCGCAA CGGCGCACGA GCCGTATGCG
GCGCGCTACG ACTTCACGAG CGCGATGGCC GTGCAGTTGC TGAAGTCGAT GGCGCCGGCG
CTCGCGCCGC TGATCGAACG CCCGGCCAGC ACCGGCACGC GCACCGCGGG CCCCGCCCCG
CAGGCGGAAA CACCCGCGCC GGGGGCCGCT ACCGCGCAAC CGTCCTGA
|
|---|
| Protein sequence | MNRPLNRILP RVTGPASVWT WVKWSLLAAL LIAVAIVARL VQSEIETSRL QAHYLSELTR
DVGYTVETGP SDHIRFPANG PYDQRLGYSM IPGFQERLLA RGFVVSKQAR DSQRMLSLGE
RGLFLPFEEK DQAGLMLFDS TGAPLFATVF PQRVYPDFDM VPRVVADSLL FIEDRYLLDA
NEPNRNPAID WGRFSRAVAD QALHVVNRHQ ARPGGSTLAT QIEKFRHSPE GRTATPPEKL
RQIASASVRA YLNGPQTMLA RRTIVVRYLN SVPLAARPHI GEITGIGDGL AAWYGRDFND
VNRILSAPTT GDNVDEQGKT FREVLSLIIA QRAPSYFLNR GYPALQKLTD SYLRLLSNGG
VISPALRDAA LAAEIERSAP PAAAHVQSFV SRKAVTSARA SLLSALGISD LYQLDQFDLQ
ATSTLDNGVQ QAVAERLAQA STRDGAQKAG LYGFEMLAPK DDPSHLTYSF TLYEHRNGAN
LLRVQTDSVN EPFDVNRGGR INLGSTAKLR TLITYLQIVS DLHARYANLS NAELARVKPD
PIDGLSHWAL DYLSHTRDRS LQAMLDAAVE RKYSASPDVF YTGGGAQVFS NFEKSDNGRI
LTLHTAFEHS VNLVFVRLMR DIVHYETLQA AGPSSSWLGD PEQRQHYLQQ FVDGESQVYV
KRYYTRYAGK APDDALALML KDVRKSPPKI ATVLRSVAPN ESLAWFDAQM RVQLKGTPAA
TLSDDDLAKL YAKYAIDRFN LNDRGYIASV HPLALWTLNY LRAHPAASLA DVQRDSHDAR
FYTYSWLYKT RYHATQDRRI RRMVELRAYA EITKSWRALG YPFAEVTPSY AAAIGASGDQ
PDALAKLIGL IANGGQKAPT ETITRLDFAK GTPYETRFVR AVAQPQPMLS PEIVNVAHTL
LRDVVLNGTA RRLAGGFTLP DGKTLDVYGK TGTGDQRFNV YARGARLIES RKVNRSGTFV
FVLGDRFFGV LTATAHEPYA ARYDFTSAMA VQLLKSMAPA LAPLIERPAS TGTRTAGPAP
QAETPAPGAA TAQPS
|
|---|
| |