| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5926 |
|---|
| Symbol | |
|---|
| ID | 3751157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 3049528 |
|---|
| End bp | 3050853 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637764245 |
|---|
| Product | ABC sugar transporter, periplasmic ligand binding protein |
|---|
| Protein accession | YP_370164 |
|---|
| Protein GI | 78067395 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.517551 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGAA AGATGCTCGA CGCCGCCGCG CGCTGCTTCG CCGGAGCCGC GCTCGCGACG
GCGGCCAGCG CCGCGTCCGC CGGCACGCTG ACGATCGCGA CGCTGAACAA TCCCGACATG
ATCGAGCTGA AGAAGCTGTC GCCGGCGTTC GAGAAGGCGA ACCCGGACAT CAAGCTGAAC
TGGGTGATCC TCGAGGAGAA CGTGCTGCGC CAGCGCGCGA CGACCGACAT CACGACCGGC
AGCGGCCAGT TCGACGTGAT GGCGATCGGC ACCTACGAGA CGCCGCAGTG GGGCAAGCGC
GGCTGGCTCG CGCCGATGAC GGGCCTGCCC GCCGACTACG ACCTGAACGA CATCGTGAAG
ACCGCGCGCG ACAGCCTGTC GTACAACGGC CAGCTGTACG CGCTGCCGTT CTACGTCGAG
AGCTCGATGA CGTTCTACCG CAAGGACCTG TTCGCGGCGA AGGGGCTGAA GATGCCCGAC
CAGCCGACCT ACGACCAGAT CGCCGAATTC GCGGACAAGC TCACCGACAA GGCGAAGGGC
ACCTACGGGA TCTGCCTGCG CGGCAAGGCC GGCTGGGGCG AGAACATGGC GTACGTGTCG
ACGGTCGTGA ACACGTTCGG CGGGCGCTGG TTCGACGAGA ACTGGAATGC GCAGCTCACG
TCGCCGGAAT GGAAGAAGGC GATCACGTTC TACGTGAACC TGCTGAAGAA AGACGGCCCG
CCGGGAGCGA GCTCGAACGG CTTCAACGAG AACCTGACCC TGACCGCATC GGGCAAGTGC
GCGATGTGGA TCGATGCGAC GGTCGCGGCC GGCATGCTCT ATAACAAACA GCAGTCGCAG
GTCGCCGACA AGATCGGCTT CGCGGCCGCG CCGGTCGCGG CCACGCCGAA GGGCTCGCAC
TGGCTGTGGG CGTGGGCGCT GGCCGTGCCG AAGACGTCGA AGCAGCAGGA CGCCGCACGC
AAGTTCATCG CGTGGGCGAC GTCGAAGCAG TACATCGAGA TGGTCGGCAA GGATGAAGGC
TGGGCGTCGG TGCCGCCGGG CACGCGCACG TCGACGTATC AGCGCCCCGA GTACAAGGCC
GCCGCGCCGT TCTCGGACTT CGTGCTGAAG GCGATCGAGA CGGCCGACCC GAACGATCCG
TCGCTGAAGA AGGTGCCGTA CACGGGCGTG CAGTACGTCG GGATTCCTGA ATTCCAGTCG
TTCGGCACGG TGGTCGGCCA GTCGATCGCC GGTGCGGTGG CCGGCCAGAT GACGGTCGAC
CAGGCGCTTG CCGCCGGGCA GGCCGCCGCC GACCGCGCAG TGCGGCAGGC CGGCTACAAG
AAGTAA
|
|---|
| Protein sequence | MQRKMLDAAA RCFAGAALAT AASAASAGTL TIATLNNPDM IELKKLSPAF EKANPDIKLN
WVILEENVLR QRATTDITTG SGQFDVMAIG TYETPQWGKR GWLAPMTGLP ADYDLNDIVK
TARDSLSYNG QLYALPFYVE SSMTFYRKDL FAAKGLKMPD QPTYDQIAEF ADKLTDKAKG
TYGICLRGKA GWGENMAYVS TVVNTFGGRW FDENWNAQLT SPEWKKAITF YVNLLKKDGP
PGASSNGFNE NLTLTASGKC AMWIDATVAA GMLYNKQQSQ VADKIGFAAA PVAATPKGSH
WLWAWALAVP KTSKQQDAAR KFIAWATSKQ YIEMVGKDEG WASVPPGTRT STYQRPEYKA
AAPFSDFVLK AIETADPNDP SLKKVPYTGV QYVGIPEFQS FGTVVGQSIA GAVAGQMTVD
QALAAGQAAA DRAVRQAGYK K
|
|---|
| |