Gene Bcep18194_A5878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A5878 
Symbol 
ID3751109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp2999004 
End bp2999789 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content70% 
IMG OID637764197 
Product3-deoxy-manno-octulosonate cytidylyltransferase 
Protein accessionYP_370116 
Protein GI78067347 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.14587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.445402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAC CCTTCATCGC CGTCATTCCC GCCCGGCTCG CGTCGACGCG ACTCCCGAAC 
AAGCCGCTCG CCGATCTCGG CGGCAAGCCG ATGGTCGTGC GCGTCGCCGA ACGCGCGCGC
GAAGCGGGCG CGCAGCAGGT GCTGGTCGCG TCCGACGCGC AGAGCGTGCT CGATGCGGCC
CGCGATCACG GCTTCGAAGC GGTGCTGACG CGCGCCGACC ATCCGTCCGG CACCGACCGG
CTCGCGGAAG TCGCGGCGAC GCTCGGGTGG AGCGACGACA CCGTCGTCGT CAACGTGCAG
GGCGACGAGC CGCTGATCGA CCCCGTGCTC GTACGCGACG TAGCGTCGCA CCTCGCCGCC
CACCCGGCCT GCGCGATTGC GACGGCCGCC CACCCGATCC ACGACGCCGC CGACGTGTTC
AACCCGAACG TGGTGAAGGT CGCGCTCGAC GCGCAGAGCG TCGCGCTGTA CTTCTCGCGT
GCGCCGATTC CGTGGAGCCG GGACGCATAC CAGCCGCACT GGCCCGACGT CGCGGCCATG
CCTGCGCCCG CTTTCCCGGT CTACCGGCAC ATCGGCCTCT ATGCGTATCG CGCGCGTTTC
CTGCGCACGT ATCCGACGCT CGCGCAGGCG CCGATCGAAC AGGCCGAGCA GCTCGAACAG
CTGCGCGCGC TGTGGCACGG CGAGCGCATC GCAGTGCTGA TCACCGAGTC CGCGCCCGAA
GCCGGAATCG ACACGCCGGC CGATCTCGCA CGCGTGCAGG CCCTTTTTCA GCCGTCATCA
AAATAA
 
Protein sequence
MTQPFIAVIP ARLASTRLPN KPLADLGGKP MVVRVAERAR EAGAQQVLVA SDAQSVLDAA 
RDHGFEAVLT RADHPSGTDR LAEVAATLGW SDDTVVVNVQ GDEPLIDPVL VRDVASHLAA
HPACAIATAA HPIHDAADVF NPNVVKVALD AQSVALYFSR APIPWSRDAY QPHWPDVAAM
PAPAFPVYRH IGLYAYRARF LRTYPTLAQA PIEQAEQLEQ LRALWHGERI AVLITESAPE
AGIDTPADLA RVQALFQPSS K