| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5867 |
|---|
| Symbol | |
|---|
| ID | 3751098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 2987625 |
|---|
| End bp | 2989109 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637764186 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_370105 |
|---|
| Protein GI | 78067336 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.330086 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.29148 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTCC CTACAATGTC GGCTGTCCCG CGCCACCATC CCGCCCCCAT GTTCCAGCGC
CCGCCCGCCG CCGCTCCCGG CGAAAAGAAC CTCACCGTGA TGCTCTGGCT CGTCGCAACG
GGCTTCTTCA TGCAGACGCT CGATTCGACG ATCGTGAACA CGGCGCTGCC GTCGATGGCC
GCGAGCCTCG GCGAATCGCC GCTGCGCATG CAGTCGGTCG TGATCGCGTA CTCGCTGACG
ATGGCGGTGA TGATCCCCGT ATCGGGCTGG CTCGCCGATA CCTTCGGCAC GCGGCGCGTG
TTCTTCAGCG CGATCCTGGT GTTCTCGCTC GGCTCGCTGC TGTGCGCCAA CGCGCATACG
CTGACGCAGC TCGTCGCGTT CCGCGTCGTG CAGGGCGTCG GCGGCGCGAT GCTGCTGCCG
GTCGGGCGGC TCGCGGTGCT GCGCACCTTC CCGGCCGAAC GCTACCTGCC CGCGCTGTCG
TTCGTCGCGA TTCCCGGCCT GATCGGCCCG CTGATCGGGC CGACGCTCGG CGGCTGGCTC
GTGAAGATCG CGTCGTGGCA CTGGATCTTC CTGATCAACG TGCCGGTCGG CGTCGCGGGC
TGCATCGCGA CCTTCTATTC GATGCCCGAT TCGCGCAACC CGGCCGTCGG CCGTTTCGAC
CTGAAGGGCT ATCTGCTGCT GACGATCGGC ATGGTCGCGA TCTCGCTGTC GCTCGACGGG
CTCGCCGATC TCGGGATGCA GCACGCGGCC GTGCTCGTGC TGCTGATCCT GAGCCTTGCA
TGCTTCGTCG CGTACGGGCT GTATGCGGTG CGCGCGCCGC AACCGATCTT CTCGCTCGAA
CTGTTCCGGA TCCACACGTT CAGCGTCGGG CTGCTCGGCA ACCTGTTCGC GCGGATCGGC
AGCGGCGCGA TGCCGTACCT GATCCCGCTG CTGCTGCAGG TGAGCCTCGG CTACTCGGCG
TTCGAGGCCG GGCTGATGAT GCTGCCGGTG GCCGCCGCCG GGATGTTCTC GAAGCGGATC
ATCACGCGCC TGATCACGCG GCACGGCTAC CGCAAGGTGC TGCTCGCGAA CACGATCATG
GTCGGCGTGA TGATGGCGAG CTTCGCGCTG ATGCGCGACA CGGTGCCCGT CTGGGTGAAG
GTCGTACATC TCGCGCTGTT CGGCGGCTTC AACTCGATGC AGTTCACCGC GATGAACACG
CTGACGCTGA AGGATCTCGG CACGGGCGGC GCGAGCAGCG GCAACAGCCT GTTCTCGCTC
GTGCAGATGC TGTCGATGAG CCTCGGCGTC ACGGTGGCGG GCGCGCTGCT CGCGACGTTC
ACGGGCATGC TGCGCACCGT GACGCCGAGC AACACGCTGC CGGCGTTCCA TGCGACCTTC
ATCTGCGTCG GGATCATCAC GGCGGCTTCC GCGTGGATCT TCGCGCAGCT CGCGCCCGAG
ATCCGCAGCA CCGCGCGCAA GACCGACCCG TCCGAGCGCG CATGA
|
|---|
| Protein sequence | MAFPTMSAVP RHHPAPMFQR PPAAAPGEKN LTVMLWLVAT GFFMQTLDST IVNTALPSMA
ASLGESPLRM QSVVIAYSLT MAVMIPVSGW LADTFGTRRV FFSAILVFSL GSLLCANAHT
LTQLVAFRVV QGVGGAMLLP VGRLAVLRTF PAERYLPALS FVAIPGLIGP LIGPTLGGWL
VKIASWHWIF LINVPVGVAG CIATFYSMPD SRNPAVGRFD LKGYLLLTIG MVAISLSLDG
LADLGMQHAA VLVLLILSLA CFVAYGLYAV RAPQPIFSLE LFRIHTFSVG LLGNLFARIG
SGAMPYLIPL LLQVSLGYSA FEAGLMMLPV AAAGMFSKRI ITRLITRHGY RKVLLANTIM
VGVMMASFAL MRDTVPVWVK VVHLALFGGF NSMQFTAMNT LTLKDLGTGG ASSGNSLFSL
VQMLSMSLGV TVAGALLATF TGMLRTVTPS NTLPAFHATF ICVGIITAAS AWIFAQLAPE
IRSTARKTDP SERA
|
|---|
| |