| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5857 |
|---|
| Symbol | |
|---|
| ID | 3751088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 2976268 |
|---|
| End bp | 2976846 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637764176 |
|---|
| Product | pseudouridine synthase, Rsu |
|---|
| Protein accession | YP_370095 |
|---|
| Protein GI | 78067326 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.833933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.396985 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGA TCGCCCTCAA CAAACCGTTC GGCACGATTT GCCAGTTTTC CGCGCACGAG
ACGCGCCCGT CGCTCGGCGA CTGGGTAAAA ACGCCCGGCG TCTACGCGGC CGGCCGGCTG
GACGCGGACA GCGAGGGGCT GCTGCTGCTC ACCGACGACG GCGCGCTGCA GGCGCGCATC
GCCGAGCCGC GCCACAAGCT CGTCAAGCGC TACTGGGCAC AGGTCGAGGG CGCGCCCGGC
CCCACCGACC TGAAGGCGCT CGCGCGCGGC GTCGACCTCG GCGACTACGT GACGCGTCCG
TGCCGCGCCG AATTCATCGA ACCGCCCGAC ACGCTGTGGC CGCGCAATCC GCCGATCCGC
TACCGCGCCG CGATCCCGAC GACGTGGATC GAGCTTGCGA TCACCGAGGG CAAGAACCGG
CAGGTGCGCC GGATGACGGC GGCCGTCGGC TTCCCGACGT TGCGCCTGGT GCGTGTCGGC
GTCGGCGCAC TGGATATATT CGCACTCGGC ATTGCACCGG GAGAAACAAT CGCGCTGCCG
CCGCGCGCGC CGTGGGATGG TTTCGCGCCC GCCGGATGA
|
|---|
| Protein sequence | MNLIALNKPF GTICQFSAHE TRPSLGDWVK TPGVYAAGRL DADSEGLLLL TDDGALQARI
AEPRHKLVKR YWAQVEGAPG PTDLKALARG VDLGDYVTRP CRAEFIEPPD TLWPRNPPIR
YRAAIPTTWI ELAITEGKNR QVRRMTAAVG FPTLRLVRVG VGALDIFALG IAPGETIALP
PRAPWDGFAP AG
|
|---|
| |