Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A5849 |
Symbol | |
ID | 3751080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 2964572 |
End bp | 2965978 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637764168 |
Product | amino acid tranporter |
Protein accession | YP_370087 |
Protein GI | 78067318 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0897353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.534597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGGTGC AGGGGAGTGG CAACGCAGTG ACACAACAAC AACGGTCGTT CGACGACATC GTCGCGCGCG AACAGGGTTT GCGCCATGCG CTGACGTCTG GGCAGATGGC GATGATCGCG ATCGGCGGCG CGATCGGCAC GGGGCTGTTC CTCGGCAGCG GGTTCGCGAT CGGGCTCGCC GGCCCGAGCG TGCTGGTTTC TTACGCGATC GGCGCGTTGA TCGCGCTGCT GCTGATGGGC GCGCTGGCGG AAATGACGGT CGCGCATCCG ACGGCCGGCT CGTTCGGCGC GTATGCCGAG CACTATGTCG GCCCGCTGGC GGGCTTCCTG GTGCGCTATG CGTACTGGTT CGCGGTCGTG TTCGCGATCG GCACCGAGAT CAGCGCGATC GCCGTGTTCA TGAAGTACTG GTTCCCGGCC GTGCCCGGCT GGTACTGGGT GATCGGCTTC TCCGCGCTGC TGATCGCCGT GAATCTCGCG AGCGTCACGC TGTACGGCAC AGTCGAATAC GCGTTCTCGC TGCTGAAGAT TGCGGCGATC GTCGTGTTCA TCGTGCTCGG CGCATACCTC GTGTGGTCGG CGCCGGCCGC ATCGGGCGTC GGTTTCGCGA ACTACACCGC GCACGGCGGC TTCATGCCGA AGGGGCCGTG GGGCACCTGG GTCGCGGTGA TCGTCGCGAT CTTCAGTTAC ATGAGCATCG AAGCCGTCGC GATCGCGGCC GGCGAGGCGC GCGATCCGCA GCACGCGGTC ACGCGCGCGT TCCGCTCGAC CGTGTTCCGG CTCGTGCTGT TCTACCTGCT GACGCTGTCG CTGATGCTCG CGATCGTGCC GTGGACGCAG GCCGGTACCG ACGAAAGCCC GTTCGTGAAG GTCATGGCCG CGACCCACGT GCCTTACGCG GCAGGCGTGA TCAACTTCGT GTTGCTGATC GCGGCGCTGT CGGCGATGAA CAGCCAGCTT TACGTGACGA CGCGGATGAT GTTCAGCCTG TCGCGCGCAC GGCTCGCGCC CGCGGTGTTC GGCCGGCTCG GCACGAACGG CGTGCCGCGC GCGGCGCTGT GGATCTCGAC GAGCGGTGTC GCGGTGGCGG CCGTGCTGGT CGCGCTCGCG CCCGACACCG CGTTCACCGT GATGATGGCG ATCGCGATGT TCGGTGCACT GTTCACGTGG CTGATGATCT TCGTCACGCA CCTGCGCTTC CGTTCGCGGT ATCGCGGCCC CGCGCTCGCG TTCCGGATGT GGGGACACCC GTTCGGCAGC CTGCTCGGTG CGGGACTCGT CGCGGCGATC CTGTTCACGA CCGCGTTCAC GCGGGAATTC CGGATGACGA TGGTGGTCGG CGTCGTGTTC GCCGTGCTGC TCACGCTCGC GTACGCGCTG CATTACCGGC ACCAGCACGC GCGTTGA
|
Protein sequence | MVVQGSGNAV TQQQRSFDDI VAREQGLRHA LTSGQMAMIA IGGAIGTGLF LGSGFAIGLA GPSVLVSYAI GALIALLLMG ALAEMTVAHP TAGSFGAYAE HYVGPLAGFL VRYAYWFAVV FAIGTEISAI AVFMKYWFPA VPGWYWVIGF SALLIAVNLA SVTLYGTVEY AFSLLKIAAI VVFIVLGAYL VWSAPAASGV GFANYTAHGG FMPKGPWGTW VAVIVAIFSY MSIEAVAIAA GEARDPQHAV TRAFRSTVFR LVLFYLLTLS LMLAIVPWTQ AGTDESPFVK VMAATHVPYA AGVINFVLLI AALSAMNSQL YVTTRMMFSL SRARLAPAVF GRLGTNGVPR AALWISTSGV AVAAVLVALA PDTAFTVMMA IAMFGALFTW LMIFVTHLRF RSRYRGPALA FRMWGHPFGS LLGAGLVAAI LFTTAFTREF RMTMVVGVVF AVLLTLAYAL HYRHQHAR
|
| |