| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5779 |
|---|
| Symbol | cobD |
|---|
| ID | 3751009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 2894668 |
|---|
| End bp | 2895612 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637764097 |
|---|
| Product | cobalamin biosynthesis protein |
|---|
| Protein accession | YP_370017 |
|---|
| Protein GI | 78067248 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
|---|
| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.642032 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATGC TGTCGCTGCC CGTCGTCGCG ATGTTCGCGG TCGCGGCTGC GATCATCGAC
CGCGCGATCG GCGAGCCGGC CGGCTGGCAC CCGCTCGTCG CGTTCGGCCG CCTCGCCGCG
CGCATCGAAG GCGCGCTGAA CACCGGCCGG CGCGGCCGCG TGGTTGGCGT CGCCGCGTGG
ATCGCGGCGG TCGTGCCGCC GGTCGCCATC GCGGCATGGC TCGCAGCCGT GCTGCCGTGG
CCGCTCGCGG CCGCGCTGCA CATCGCGCTG CTGTGGTTCG CACTCGGCGC GAAAAGCCTC
ACCGACCACG TCGCGCCGAT CGCGGCGGCC TTGCTGCGGC ATGACCTCGG CGCCGCCCGC
GCGCTGACCG CGCGCATCGT GTCGCGCGAC ACGAGCGATG CGGACGAAGG CGCGCTGTCG
CGCGCGGCCG TCGAATCGGC ACTCGAGAAC GGCAACGACG CGATCTTCGG TGCGCTGTTC
TGGTTCGTCG TCGCGGGCGG CCCCGGCGCG CTGCTGTTCC GGCTCGCGAA CACGCTCGAC
GCGATGTGGG GCTACCGCAC GCCGCGCTTC CTGACTTTCG GCTGGGCCGC CGCGCGCCTC
GACGACGCAC TGAACTGGGT GCCCGCGCGC CTCACGGCCG CGAGCTACGC GCTGCTCGGC
GACACGGCCG CCGCATGGCG CTGCTGGCGC ACGCAGGCGC ACCACTGGGA CAGCCCGAAC
GCGGGCCCGG TGATGGCTGC CGGCGCCGGC AGTTTGAACG TGCAGCTCGG CGGCCCGGCC
GTCTATCACG GCGAGATCGA GGACCGTCCC GCGCTCGGCA CCGGCGCCGC GGCGACCGCC
GTCCACATCG TCGCCGCGCT GTCGCTCGTC ACGCGCACGC TTGCCCTGTG GCTCGCGCTG
CTGGTCGCAA GCGGCGCACT CGCCATGGCC ACTCATCATG TCTGA
|
|---|
| Protein sequence | MLMLSLPVVA MFAVAAAIID RAIGEPAGWH PLVAFGRLAA RIEGALNTGR RGRVVGVAAW
IAAVVPPVAI AAWLAAVLPW PLAAALHIAL LWFALGAKSL TDHVAPIAAA LLRHDLGAAR
ALTARIVSRD TSDADEGALS RAAVESALEN GNDAIFGALF WFVVAGGPGA LLFRLANTLD
AMWGYRTPRF LTFGWAAARL DDALNWVPAR LTAASYALLG DTAAAWRCWR TQAHHWDSPN
AGPVMAAGAG SLNVQLGGPA VYHGEIEDRP ALGTGAAATA VHIVAALSLV TRTLALWLAL
LVASGALAMA THHV
|
|---|
| |