| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5682 |
|---|
| Symbol | |
|---|
| ID | 3750910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 2788458 |
|---|
| End bp | 2789375 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637763998 |
|---|
| Product | spermidine synthase-like |
|---|
| Protein accession | YP_369920 |
|---|
| Protein GI | 78067151 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0421] Spermidine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.385407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.952882 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAC TGATCAAGCG CGCGTCCGCC GAGGCGCGCG CGTCCAAGCG CAGCAAGCCG
TCCGCCTACA ACGGCTCCGA AAAACTCCAG CCGCCGCGCG TGAAGCGCCG CCCGGAGATC
GACGAACACG ACGACGTGCC CGTGCTCGAA GCCCCGCGCA AGCCGCGCTT CGCGCCCGTC
ACGTTCTCGG AAGAGGGCGG CGTGCGCTTC CTGCATTTCG GTACCGAATG GGTGCAGGGC
GCGATGCGGA TTTCGAAGCC GCTGCATATC GAGCTCGAAT ACGCCCAGCA GATGATGGCG
TGGCTGCTGT TCCTCGAAAC GCCCGAGCGG GTCGTCCAGC TCGGGCTCGG CACCGGCGCG
CTGACCAAGT TCTCGCACCG CTTCCTGCCG CACGCGAAGG TCGAGGCCGT CGAGCTGAAC
CCGGCCGTAA TCGTCGCCGC GCGCACGATG TTCGCGCTGC CACCCGACGA TGCACGCCTC
GCCGTGCACG AAGCCGACGC GTGGGATTTC GTCAACGATC CGGCCAACCG CGGCACCACG
GGCGCGATCC AGATCGACCT GTACGACGCG ACCGCGCGCG GCCCCGTGCT CGACAGCGTT
TCGTTCTACC GCGCGGTGCG CGGCTGCCTC GCCGACGCGG GCATCGCGAC GATCAACCTG
TTCGGCGATC ATCCGAGCTT CGTGCGCAAC ATGAAGCACC TGAACGCGGC GTTTGATCAC
CGCGTGATCG CGCTGCCGGA AGTGCATGAC GGCAACCGGA TCGCGATCGC GTTCTCGGGC
CCCGCGCTCG ACGTGTCGTT CGCGCAGCTC GACGAGCGTG CGAAGCTGAT CGAGGACACG
CTGAAGCTGC CCGCACGCAA GTGGGTGAAA GCTTTGAAAG AAACGACCGG CGCGCGCGAC
GCTTCGTTCG CGATCTGA
|
|---|
| Protein sequence | MTRLIKRASA EARASKRSKP SAYNGSEKLQ PPRVKRRPEI DEHDDVPVLE APRKPRFAPV
TFSEEGGVRF LHFGTEWVQG AMRISKPLHI ELEYAQQMMA WLLFLETPER VVQLGLGTGA
LTKFSHRFLP HAKVEAVELN PAVIVAARTM FALPPDDARL AVHEADAWDF VNDPANRGTT
GAIQIDLYDA TARGPVLDSV SFYRAVRGCL ADAGIATINL FGDHPSFVRN MKHLNAAFDH
RVIALPEVHD GNRIAIAFSG PALDVSFAQL DERAKLIEDT LKLPARKWVK ALKETTGARD
ASFAI
|
|---|
| |