Gene Bcep18194_A5593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A5593 
Symbol 
ID3750821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp2692711 
End bp2693274 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content62% 
IMG OID637763909 
ProductRNA polymerase factor sigma-70 
Protein accessionYP_369831 
Protein GI78067062 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.443182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCAG ACAAGGAACT CGCCGACTTT CTGGCGGGCG TCGAAAGGCG CGCGTTCAAG 
CAGGCTGCGT ACGCCGTGCG TGACGACGAT GCGTCGCTCG ACATCGTGCA GGACGCGATG
ATCAAGCTTG CGGAGAAGTA CGGCGACCGG CCGGCGGCAG AACTGCCGCT GCTTTTTCAG
CGGATCCTGC AGAACGCGAT CCACGACTGG TTCCGCCGGC AGAAGGTCCG CAATACGTGG
GTCACGCTCT TCTCGTCGCT GAACAACAGC GACGACGACG ACTTCGACCC CCTCGAAACA
CTCGAATCCG CGGACGACAA CGCGGGCGTC GAGAGCAGCG AGCACCGCCT CGAACGAGAG
CAGGTTCTGG CCCTGATCGA CGAAGAAATC CAGAAGCTTC CGGCGCGTCA ACGGGAAGCG
TTCCTGATGC GTTATTGGGA AGATATGGAT GTCGCCGAGA CGGCCGCCGC AATGGGGTGC
TCCGAGGGCA GCGTGAAGAC GCACTGCTCA CGGGCCACCC ACACGCTGGC GCACGCGCTC
AAGGCCAAAG GAATCACGCT ATGA
 
Protein sequence
MASDKELADF LAGVERRAFK QAAYAVRDDD ASLDIVQDAM IKLAEKYGDR PAAELPLLFQ 
RILQNAIHDW FRRQKVRNTW VTLFSSLNNS DDDDFDPLET LESADDNAGV ESSEHRLERE
QVLALIDEEI QKLPARQREA FLMRYWEDMD VAETAAAMGC SEGSVKTHCS RATHTLAHAL
KAKGITL