| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5587 |
|---|
| Symbol | |
|---|
| ID | 3750815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 2685355 |
|---|
| End bp | 2686899 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637763903 |
|---|
| Product | 2-isopropylmalate synthase |
|---|
| Protein accession | YP_369825 |
|---|
| Protein GI | 78067056 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.774339 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA AGCTGATCAT TTTCGATACG ACGTTGCGTG ACGGCGAACA ATCGCCCGGT
GCGTCGATGA CGAAGGAAGA GAAAATCCGC ATCGCGAAGC ACCTCGAGCG GATGAAGGTC
GATGTGATCG AGGCCGGCTT CGCGGCCAGC TCGAACGGCG ATTTCGACGC GATCCACACG
ATCGCCGGTC TCATCAAGGA CAGCACGATC TGCTCGCTGG CGCGCGCCAA CGACAAGGAC
ATCCAGCGCG CAGCCGACGC GCTGAAGCCG GCCGAGAGCT TCCGGATCCA CACGTTCATC
GCGACGTCGC CGCTGCACAT GGAGAAGAAG CTGCGGATGA CGCCCGACCA GGTGTTCGAG
CAGGCGCGCC TCGCGGTGCG TTTCGCGCGC AAGTTCACCG ACAACGTCGA GTTCTCGCCG
GAAGACGGCA GCCGCTCCGA CATGGATTTC CTGTGCCGCG TGCTGGAAGC CGTGATTGCC
GAGGGGGCGA CGACGATCAA CATCGCCGAC ACGGTCGGCT ATGGCGTGCC GGAGCTGTAC
GGCAACTTGG TGAAGACGCT GCGCGAACGC ATTCCGAATT CGGACAAGGC GATCTTCTCG
GTGCATTGCC ATAACGACCT CGGGATGGCG GTCGCAAACT CGCTCGCCGG CGTGAAGATC
GGCGGCGCGC GTCAGATCGA GTGCACGATC AACGGTCTCG GCGAGCGCGC GGGCAACACG
TCGCTCGAAG AAATCGTGAT GGCCGTGAAG ACGCGCAAGG ACTACTTCGG TCTCGACGTC
GGCATCGACA CGTCGCAGAT CGTGCCGACG TCGAAGCTCG TGTCGCAGAT CACCGGTTTC
GTCGTGCAGC CGAACAAGGC GGTGGTCGGT GCGAACGCAT TCGCGCATGC GTCGGGCATC
CACCAGGACG GCGTGCTGAA GGCGCGCGAC ACCTACGAGA TCATGCGCGC GGAAGACGTG
GGCTGGACCG CGAACAAGAT CGTGCTCGGC AAGCTGTCGG GCCGTAACGC ATTCAAGCAG
CGCCTGCAGG AGCTCGGCGT GTCGCTCGAC AGCGAGAGCG AACTGAACGC CGCGTTCATG
CGCTTCAAGG ATCTGGCCGA CCGCAAGGCC GAGATCTTCG ACGAAGACAT CATCGCGATC
GTGTCCGAGG AATCGGCACT TGCGCACGAG CAGGAGCACT TCAAGTTCGT GTCGCTGTCG
CAGCACTCGG AAACGGGCGA GCAGCCGCAT GCGAAGGTCG TGTTCGGGGT CGAAGGCAAG
GAAGTGACCG GCGAGGCACG CGGCAACGGT CCGGTCGATG CGACGTTCAA CGCGATCGAG
AGCGAAGTCG GCAGCGGTTC CGAGTTGCTG CTGTACTCGG TGAACGCGAT CACGACCGGC
ACGCAGGCAC AGGGCGAAGT GACGGTCCGG TTGTCGAAGA GCGGGCGGAT CGTCAATGGC
GTCGGCACCG ATCCGGACAT CGTCGCCGCA TCCGCGAAGG CCTACATCTC CGCACTGAAC
AAGCTGCATT CGAAGGACGA CAAGGTCAAT CCGCAGCGCT CGTAA
|
|---|
| Protein sequence | MTDKLIIFDT TLRDGEQSPG ASMTKEEKIR IAKHLERMKV DVIEAGFAAS SNGDFDAIHT
IAGLIKDSTI CSLARANDKD IQRAADALKP AESFRIHTFI ATSPLHMEKK LRMTPDQVFE
QARLAVRFAR KFTDNVEFSP EDGSRSDMDF LCRVLEAVIA EGATTINIAD TVGYGVPELY
GNLVKTLRER IPNSDKAIFS VHCHNDLGMA VANSLAGVKI GGARQIECTI NGLGERAGNT
SLEEIVMAVK TRKDYFGLDV GIDTSQIVPT SKLVSQITGF VVQPNKAVVG ANAFAHASGI
HQDGVLKARD TYEIMRAEDV GWTANKIVLG KLSGRNAFKQ RLQELGVSLD SESELNAAFM
RFKDLADRKA EIFDEDIIAI VSEESALAHE QEHFKFVSLS QHSETGEQPH AKVVFGVEGK
EVTGEARGNG PVDATFNAIE SEVGSGSELL LYSVNAITTG TQAQGEVTVR LSKSGRIVNG
VGTDPDIVAA SAKAYISALN KLHSKDDKVN PQRS
|
|---|
| |