| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5518 |
|---|
| Symbol | |
|---|
| ID | 3750740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 2611697 |
|---|
| End bp | 2613712 |
|---|
| Gene Length | 2016 bp |
|---|
| Protein Length | 671 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637763828 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_369756 |
|---|
| Protein GI | 78066987 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4147] Predicted symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.703917 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACGC ATCGACTGAT CCGCGCATAC GCGCTCTACA CGCTGGGGTT TCTCGGGTTC
GTGCTGCTGA TGTGGCGGAT CGAGCGTGCC ACCGGCTCCG GCGTCTGGAT CGGCTACGTG
TTCCTGTTCG TGCCGATTGC CGTGTATGCG GTGATCGGGC TGCTGTCGCG CACGTCCGAT
CTCGTCGAGT ACTACGTGGC CGGGCGGCGC GTGCCGTCTG CCTTCAACGG AATGGCGACG
GCGGCCGACT GGCTATCGGC CGCATCGTTC ATTGGCCTGG CCGGATCGCT CTACTCGACC
GGCTACGATG CACTCGCGTA CGTGATGGGC TGGACGGGCG GGTTCTGCCT CGTCGCGTTC
CTGCTCGCGC CTTATGTGCG CAAGCTCGCG CGCTACACGA TTCCCGATTT TCTCGGTACG
CGCTTTTCGA GCACAGCCGT GCGCGCACTG GCGGCCGGTG CGGCGATCCT GTGTTCGTTC
GTGTACCTGG TCGCGCAGAT CCAGGGGATT GGCCTGATCG CGACACGCTT CATCGGCGTC
GATTTCGCGA TCGGGATCTT CTGCGGGCTC GCGGGCATTC TCGTGTGCTC GTTTCTCGGC
GGGATGCGCG CGGTCACGTG GACGCAGGTC GCGCAGTACA TCATCCTGAT CAGCGCGATC
CTGATTCCGG TGTCGCTGAT CGCGATGAAA AACGGGCTCG GCCCCGTGCC GCAGTTCAAT
TACGGCAAGC TGATGGAGCG GGTCGCGGCG CGTGAGGCGC AGGTGCGCGA TGCCTTCGAC
GAGCAGCAGG TGCGCGACGC GTATCGCCGG CAAGCGGCGG ATATCCAGAC GCGGCTCGAC
CGGCTGCCGG CATCCTATGC GGACGCACGC CGCCATCTCA CCGACCAACT GGCCGACCTG
CGGCGCCACA ACGGGCCGCT GCGCGAGATC AACCAGCGCG AGCGCGAGCT GGCCGACTTC
CCGCGCGATC CGGCGGCGGC GCGCGTCGCG TGGACGCAGG CGCGCGACGA TCTGCTGGCC
CGTGCCGAGC CGCCCGTGCC GATGCACGAG CCGTTTCCCG CCGCGAGCGA TGACGAACGC
AAGCCGCGCG AGCGGAATTT CCTTGCACTA CTGCTGTGCC TGTCGCTCGG CACCGCGAGC
CTGCCGCACA TCCTGACGCG CTACAACACG ACCACGTCGG TTGCGTCGGC GCGGCGCTCG
GTCGGGTGGA CCTTGTTCTT CATCGCGCTG TTCTACCTGA GCGTGCCGGT GCTCGCGGTG
CTGATCAAGT ACGAGATCCT CGCGAACCTC GTCGGACGGC CGTTCGCCGA ATTGCCGGCG
TGGGTCACGC AATGGCATCA CTTCGAACCC GACCTGATCA GCGTCGTCGA AGTGATTCGC
GACGGCATCG TGCACTGGTC GGAAATCCAG ATGCAGCCGG ACATGGTCGT GCTGGCCGCG
CCGGAGATCG CGGGGCTGCC GTATGTCGTG TCGGGGCTGA TCGCGGCCGG TGCGCTTGCC
GCGGCGCTGT CGACCGCGGA CGGGCTGCTG CTGACGATCG CCAACGCGCT GTCGCACGAC
GTCTATTACT GCATGGTCGC GCCCGATGCA TCGAGCCAGC GGCGCGTGAC GATCTCGAAG
GTGCTGCTGC TCGGCGTCGC CTTGTTCGCG TCGTATGTCG CGTCGCTCAA TACCGGGAAG
ATCCTGTTTC TCGTCGGCGC CGCGTTCTCG CTGGCGGCCT CGAGCTTCTT TCCGGTGCTC
GTGCTCGGCG TGTTCTGGAA GCGCACGACG ACGCGCGGTG CAATCGCCGG GATGGTGACG
GGGCTCGCGG TGTGCGTGTA CTACATCGTG TCGACCTATC CGTTCTTCAC GCAGCTGACG
GGGTTCGCGG GGCGCACGTG GTTCGGGATC GAGTCGATCA GTTCGGGGGT GTTCGGGGTA
CCGGCGGGGT TCGCGGTGGC GATCGTCGTG AGTCTGCTTG ATCGAAAGCC GGATGAATAT
ACGCGGGCGC TGGTGGATTA CATCCGGCAT CCGTGA
|
|---|
| Protein sequence | MLTHRLIRAY ALYTLGFLGF VLLMWRIERA TGSGVWIGYV FLFVPIAVYA VIGLLSRTSD
LVEYYVAGRR VPSAFNGMAT AADWLSAASF IGLAGSLYST GYDALAYVMG WTGGFCLVAF
LLAPYVRKLA RYTIPDFLGT RFSSTAVRAL AAGAAILCSF VYLVAQIQGI GLIATRFIGV
DFAIGIFCGL AGILVCSFLG GMRAVTWTQV AQYIILISAI LIPVSLIAMK NGLGPVPQFN
YGKLMERVAA REAQVRDAFD EQQVRDAYRR QAADIQTRLD RLPASYADAR RHLTDQLADL
RRHNGPLREI NQRERELADF PRDPAAARVA WTQARDDLLA RAEPPVPMHE PFPAASDDER
KPRERNFLAL LLCLSLGTAS LPHILTRYNT TTSVASARRS VGWTLFFIAL FYLSVPVLAV
LIKYEILANL VGRPFAELPA WVTQWHHFEP DLISVVEVIR DGIVHWSEIQ MQPDMVVLAA
PEIAGLPYVV SGLIAAGALA AALSTADGLL LTIANALSHD VYYCMVAPDA SSQRRVTISK
VLLLGVALFA SYVASLNTGK ILFLVGAAFS LAASSFFPVL VLGVFWKRTT TRGAIAGMVT
GLAVCVYYIV STYPFFTQLT GFAGRTWFGI ESISSGVFGV PAGFAVAIVV SLLDRKPDEY
TRALVDYIRH P
|
|---|
| |