| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5424 |
|---|
| Symbol | lysS |
|---|
| ID | 3750643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 2493938 |
|---|
| End bp | 2495512 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637763731 |
|---|
| Product | lysyl-tRNA synthetase |
|---|
| Protein accession | YP_369662 |
|---|
| Protein GI | 78066893 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCCTTCC CGTTTGCGTT GCCGCACCCA CTCCGAATTC CGACCATCAT GACCGAACCG
ACCCAAACGC AGCCCGCCGT CACCGCGGAC GAAAACCAGA TCATCGCCGA GCGCCGCGAG
AAGCTGCGCG CCCTGCGCGA GCAAGGCGTC GCCTACCCGA ACGATTTCCG CCCGACGCAT
CACGCAGCCG ATCTGCAGAC GACCTTCGCC GACTCGGACA AGGCCGCGCT GGAAGCGAAC
CCGGTCGAGG TGTCGGTTGC CGGCCGGATG ATGCTCAAGC GCGTGATGGG CAAGGCAAGC
TTCGCGACGG TGCAGGACGG TTCGGGCCAG ATCCAGTTCT TCGTGACGCC GAACGACGTC
GGCGCGGAAA CCTACGACGC ATTCAAGAAG TGGGACCTCG GCGACATCGT CGCCGCGCGC
GGCGTGCTGT TCCGCACCAA CAAGGGCGAG CTGTCGGTCC AGTGCAAGGA ACTGCGCCTG
CTGTCGAAGG CGCTGCGTCC GCTGCCGGAC AAGTTCCACG GCCTGTCGGA CCAGGAAATG
CGCTACCGCC AGCGCTACGT CGACCTGATC GTCACGCCGG AAACGCGTGA TACGTTCCGC
GCCCGCACCA AGACGATCGC GTCGATCCGC AAGTTCATGG ACAACGCCGA GTTCATGGAA
GTCGAGACGC CGATGCTGCA CCCGATCCCG GGCGGCGCGG CCGCGAAGCC GTTCGTCACG
CATCACAACG CGCTCGACAT GCAGATGTTC CTGCGCATCG CACCGGAGCT GTACCTGAAG
CGCCTGATCG TCGGCGGCTT CGAACGCGTG TTCGAAATCA ACCGCAACTT CCGGAATGAA
GGCGTGTCGC CGCGTCACAA CCCGGAATTC ACGATGATGG AGTTCTACGC CGCGTACACC
GACTATCGCT GGCTGATGGA CTTCACCGAG CAACTGATCC GCCAGGCGGC GATCGATGCG
CTCGGCACCG CGACGATCCA GTACCAGGGC CGCGAGCTCG ACCTCGCGAA GCCGTTCCAC
CGCCTGACGA TCACGCAGGC GATCCAGAAG TACGCGCCGG ACTACACCGC CGGCCAGCTG
TCGGACGACG CGTTCCTGCG CACCGAACTG AAGCGCTTCG GCGTCGACGT ATCGCAGCCG
GCGTTCCTGA ACGCGGGCAT CGGCGCGCTG CAACTCGCGC TGTTCGAGGA AACGGCCGAA
GCGCAGCTGT GGGAGCCGAC CTTCATCATC GACTACCCGG TCGAAGTGTC GCCGCTCGCA
CGTGCATCGG ATACGGTGCC GGGCATCACC GAGCGTTTCG AGCTGTTCAT GACCGGCCGC
GAAATCGCGA ACGGCTTCTC GGAGCTGAAC GATCCGGAAG ACCAGGCTGC GCGCTTCAAG
AAGCAGGTCG AGCAGAAGGA TGCGGGCGAC GAGGAAGCGA TGTTCTTCGA CGCCGACTAC
ATCCGCGCAC TCGAATACGG GATGCCTCCG ACCGGCGGCT GCGGGATCGG CATCGACCGT
CTCGTGATGC TGCTGACCGA CAGCCCGACG ATCCGCGACG TGCTGCTGTT CCCGCATCTG
CGCCGCGAAG ACTGA
|
|---|
| Protein sequence | MPFPFALPHP LRIPTIMTEP TQTQPAVTAD ENQIIAERRE KLRALREQGV AYPNDFRPTH
HAADLQTTFA DSDKAALEAN PVEVSVAGRM MLKRVMGKAS FATVQDGSGQ IQFFVTPNDV
GAETYDAFKK WDLGDIVAAR GVLFRTNKGE LSVQCKELRL LSKALRPLPD KFHGLSDQEM
RYRQRYVDLI VTPETRDTFR ARTKTIASIR KFMDNAEFME VETPMLHPIP GGAAAKPFVT
HHNALDMQMF LRIAPELYLK RLIVGGFERV FEINRNFRNE GVSPRHNPEF TMMEFYAAYT
DYRWLMDFTE QLIRQAAIDA LGTATIQYQG RELDLAKPFH RLTITQAIQK YAPDYTAGQL
SDDAFLRTEL KRFGVDVSQP AFLNAGIGAL QLALFEETAE AQLWEPTFII DYPVEVSPLA
RASDTVPGIT ERFELFMTGR EIANGFSELN DPEDQAARFK KQVEQKDAGD EEAMFFDADY
IRALEYGMPP TGGCGIGIDR LVMLLTDSPT IRDVLLFPHL RRED
|
|---|
| |