| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5341 |
|---|
| Symbol | |
|---|
| ID | 3750552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 2399374 |
|---|
| End bp | 2400513 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637763640 |
|---|
| Product | succinyl-diaminopimelate desuccinylase |
|---|
| Protein accession | YP_369579 |
|---|
| Protein GI | 78066810 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.964134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.152047 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCA CCCTAGCCCT TACCGAACAG CTGATCGCCC GCGCGTCCGT GACGCCCGAC
GACCAGCATT GCCAGCAGAT CATGACCGAG CGCCTCACCG CGCTCGGCTT CGAATGCGAG
ACCATCGCGT CGCACGGCGT GACCAACCTG TGGGCCGTCA AGCGCGGCAC CGACGGCCGC
GACGGCAAGC TGCTCGCGTT CGCGGGCCAC ACCGACGTCG TGCCGACCGG CCCGCTCGAG
CAGTGGAGCT CGCCGCCGTT CATCCCCGCC CATCGTGACG GCAAGCTGTA CGGCCGCGGC
GCGGCCGACA TGAAGACATC GCTCGCGGCA TTCGTCGTCG CGTCCGAGGA ATTCGTCGCG
GCCCATCCCG GCCACCGCGG CACGATCGCG TTCCTGATCA CGAGCGACGA GGAAGGCCCC
GCCACCGACG GCACCGTGAA GGTCGTCGAG CTGCTCGAAG CGCGCGGCGA ACGCATGGAC
TACTGCATCG TCGGCGAGCC GACGTCGACC ACCGAGCTTG GTGATGTCGT GAAGAACGGC
CGCCGCGGCT CGATGTCGGG CGAACTGGTC GTCAAGGGCG TGCAGGGCCA CATCGCGTAT
CCGCACCTCG CGAAGAACCC GATCCACCTG CTCGCGCCGG CGCTCGCCGA GCTCGCCGCC
GAGCAGTGGG ACGAAGGCAA CGAATACTTC CCGCCGACCA CCTGGCAGGT GTCGAACCTG
CACGCCGGTA CCGGTGCGTC CAACGTGATT CCCGGCCACG CCGACCTGCT GTTCAACTTC
CGCTTCTCGA CCGCCAGCAC GGTCGAGGGC CTGCAGGCAC GCGTGCACGC GATTCTCGAC
AAGCATGGCC TCGAATACAC GCTGAAGTGG TCGGTGAGCG GCCTGCCGTT CCTCACGCCG
CGCGGCGAGC TGTCGGGCGC GCTGGAAAAC GCGATCCGCA CCGAAACCGG CATCACGACC
GAACTGTCGA CGACGGGCGG CACGTCGGAC GGCCGCTTCA TCGCGCGCAT CTGCCCGCAG
GTGATCGAGT TCGGCCCGCC GAACGGCAGC ATCCACAAGA TCGACGAGCA CATCGAAGTG
CGCTTCGTCG ACCCGCTGAA GAACGTGTAC CGCCGCGTGC TCGAACAACT GATCGCCTGA
|
|---|
| Protein sequence | MSATLALTEQ LIARASVTPD DQHCQQIMTE RLTALGFECE TIASHGVTNL WAVKRGTDGR
DGKLLAFAGH TDVVPTGPLE QWSSPPFIPA HRDGKLYGRG AADMKTSLAA FVVASEEFVA
AHPGHRGTIA FLITSDEEGP ATDGTVKVVE LLEARGERMD YCIVGEPTST TELGDVVKNG
RRGSMSGELV VKGVQGHIAY PHLAKNPIHL LAPALAELAA EQWDEGNEYF PPTTWQVSNL
HAGTGASNVI PGHADLLFNF RFSTASTVEG LQARVHAILD KHGLEYTLKW SVSGLPFLTP
RGELSGALEN AIRTETGITT ELSTTGGTSD GRFIARICPQ VIEFGPPNGS IHKIDEHIEV
RFVDPLKNVY RRVLEQLIA
|
|---|
| |