| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5338 |
|---|
| Symbol | |
|---|
| ID | 3750549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 2396812 |
|---|
| End bp | 2398044 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637763637 |
|---|
| Product | succinyldiaminopimelate transaminase |
|---|
| Protein accession | YP_369576 |
|---|
| Protein GI | 78066807 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.271745 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCTT CGCCCGTGAA CCCTCGACTC GACTCGCTCC AGCCCTATCC CTTCGAAAAG
CTGCGCGCCC TGTTCAAGGA CGTGACGCCC TCCGGCGCCC TCAAACCGAT CAGCTTCGGC
ATCGGCGAGC CCAAACATGC CACCCCGGCG CTGATCCGCG ACGCCGTGGT CGCAGCGCTC
GACGGTCTCG CGTCGTACCC GGCCACCGCC GGCTCGGACG CGCTGCGCAC GTCGATCGCG
CACTGGCTCG AGCGCCGCTA CGGGCTGCCG GCCATCGATC CGGCCACGCA GGTGCTGCCC
GTGTCGGGGT CGCGCGAGGC GCTGTTCTCG CTTGCGCAGA CGGTGATCGA CGCACGCCCG
TCCGAACAGG GCGAGAAGGC GATCGTACTC TGTCCGAATC CTTTCTATCA AATTTACGAA
GGCGCCGCGC TGCTGGCCGG TGCCGAACCC TATTTCGCGA ACAGCGACCC GGCCCGCAAC
TTCGCGTGCG ACTACGCGTC CGTGCCGGAC GCGGTCTGGG CGCGCACGCA ACTGCTGTAC
GTCTGCTCGC CGGGCAACCC GACGGGCGCC GTGCTGACGC TCGACGACTG GCGCGAGTTG
TTCGCGCTGT CCGACCGCCA CGGTTTCGTG ATCGCGTCCG ACGAGTGCTA TTCGGAAATC
TATTTCGACG AAGCGGCGCC GCCGCTCGGC GGCCTCGAGG CCGCGCACCG CCTCGGCCGC
GGCTTCGAGC GGCTCGTGAT GCTGTCGAGC CTGTCGAAGC GCTCGAACGT GCCGGGCATG
CGCTCGGGCT TCGTCGCCGG CGACGCGGCG CTGCTGAAGA AATTCCTGCT GTACCGCACG
TACCACGGCG CGGCGCTGTC GCCGGTCTGG CAGCACGCGA GCATCGCCGC GTGGAACGAC
GAGGCGCACG TGCGCGAGAA CCGCGCGCTG TACCTGCAGA AGTTCAATAC CGTCACGCCG
CTGCTGGCCG ACGTGATCGA CGTGAAGCTG CCCGACGCGG CGTTCTACCT GTGGGCCAAC
GTGTCGCGCA CCGGGCTGTC GGACACCGAG TTCGCCCGCC GCCTGTACGC CGACTATAAT
GTGACGGTTC TGCCCGGCTC GTACCTGGCG CGCGACGCGC ACGGCACGAA TCCGGGCCGC
GATTTCATCC GGATCGCGCT CGTCGCGGGC ACCCCCGAAT GCGTCGAGGG CGCGCAACGC
ATCGTCGATT TCTGCCGCTC TCTCGCGCGG TAA
|
|---|
| Protein sequence | MAASPVNPRL DSLQPYPFEK LRALFKDVTP SGALKPISFG IGEPKHATPA LIRDAVVAAL
DGLASYPATA GSDALRTSIA HWLERRYGLP AIDPATQVLP VSGSREALFS LAQTVIDARP
SEQGEKAIVL CPNPFYQIYE GAALLAGAEP YFANSDPARN FACDYASVPD AVWARTQLLY
VCSPGNPTGA VLTLDDWREL FALSDRHGFV IASDECYSEI YFDEAAPPLG GLEAAHRLGR
GFERLVMLSS LSKRSNVPGM RSGFVAGDAA LLKKFLLYRT YHGAALSPVW QHASIAAWND
EAHVRENRAL YLQKFNTVTP LLADVIDVKL PDAAFYLWAN VSRTGLSDTE FARRLYADYN
VTVLPGSYLA RDAHGTNPGR DFIRIALVAG TPECVEGAQR IVDFCRSLAR
|
|---|
| |