| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5325 |
|---|
| Symbol | |
|---|
| ID | 3750536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 2377976 |
|---|
| End bp | 2378758 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637763624 |
|---|
| Product | undecaprenyl pyrophosphate synthetase |
|---|
| Protein accession | YP_369563 |
|---|
| Protein GI | 78066794 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00863948 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.440818 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTATA CCAGCTCTAC CGTTCGCGTG CCTGACGTCG GCGTCGTGCC GCGTCACATC
GCGATCATCA TGGACGGCAA CGGCCGTTGG GCGACCGAAC GCCGCTTGCC GCGCGTCGCG
GGGCACACCC GCGGCGTCGA TGCCGTGCGG GCGGTGGTCG AAGGCTGCGC GCGTGCCGGC
GTCGAATACC TGACGCTGTT CGCGTTCAGT TCGGAGAACT GGCGCCGTCC GAACGACGAA
GTGTCGTTCC TGATGCGCCT CTTCATCACC GCGCTCGAGC GCGAGGTCGG CAAGCTTCAC
GCAAACGGGA TCCGCCTGCG TGTCGTCGGC GATCTCGACC GTTTCGAGCC GCGCATCCGC
GAACTGATCC GCCGCGCCGA AACCAAGACG GCGCGCAATA CCCGTCTTAC GCTCACCATC
GCGGCCAACT ACGGCGGCCG GTGGGACATC CTGCAGGCGA CGAAGAAGCT CATCGAGCAG
GCCGTGCGCG AGGGGCGCGA GGTCGAAGTG ACAGAGGACG CGTTCGCGCC GCACCTGGCG
ATGGCCTATG CGCCGGAGCC CGATCTTTTC ATCCGTACCG GTGGCGAGCA GCGCGTCAGC
AACTTCCTGC TGTGGCAACT TGCGTACGCC GAATTCTATT TCACCGACAA ATACTGGCCG
GATTTCGACG GCGCGGCACT GGCCGACGCA ATGGCGTCGT ATACGGAGCG CGAGCGCCGC
TTCGGCCGCA CGAGCGCACA GCTCGAACCG CAATCGCAGA ACGCCGACTC CCTTTCATGC
TGA
|
|---|
| Protein sequence | MTYTSSTVRV PDVGVVPRHI AIIMDGNGRW ATERRLPRVA GHTRGVDAVR AVVEGCARAG
VEYLTLFAFS SENWRRPNDE VSFLMRLFIT ALEREVGKLH ANGIRLRVVG DLDRFEPRIR
ELIRRAETKT ARNTRLTLTI AANYGGRWDI LQATKKLIEQ AVREGREVEV TEDAFAPHLA
MAYAPEPDLF IRTGGEQRVS NFLLWQLAYA EFYFTDKYWP DFDGAALADA MASYTERERR
FGRTSAQLEP QSQNADSLSC
|
|---|
| |