| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5321 |
|---|
| Symbol | |
|---|
| ID | 3750532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 2372196 |
|---|
| End bp | 2374505 |
|---|
| Gene Length | 2310 bp |
|---|
| Protein Length | 769 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637763620 |
|---|
| Product | surface antigen (D15) |
|---|
| Protein accession | YP_369559 |
|---|
| Protein GI | 78066790 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
|---|
| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.202175 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTTCA AACCTCATCG CTTTGTACCT AAGACAGTTG CAGCGGCCGC GCTCGCCGCG
CACGGCCTCG CGGCGCATGC AGCGGCACCG TTCGTGGTGC AAGACATCAA GATCGAGGGG
CTGCAGCGCG TCGAAGCGGG TTCGGTGTTC GCCTACCTGC CGATCAAGCA GGGCGATACC
TTCACGGACG ACAAGGCATC CGAAGCAATC CGCGCGCTGT ACGCGACGGG CTTCTTCAAC
GACGTACGCA TCGCCACCCA GGGCAACGTC GTGATCGTGC AGGTGCAGGA GCGTCCGGCC
ATCGCGTCGA TCGACTTCAC CGGCACGAAG GAATTCGACA AGGACAACCT GACGAAGGCA
CTGCGCGCAG TCGGCCTCGC CGACGGCCGC TACTACGACA AGGCGCTCGT CGACAAGGCG
GAGCAGGAGC TCAAGCGCCA GTACCTCACG CGCGGCTTCT ACGCGGCCGA GGTCAAGACG
ACGGTCACGC CGGTCGACGC GAACCGCGTG TCGATCCTGT TCGCGGTGGC CGAAGGTCCG
AGCGCGAAGA TCCGCCAGAT CAACTTCATC GGCAACAAGG CGTTCAAGAC GAGCACGCTG
CGTGACGAGA TGCAGCTGTC GACGCCGAAC TGGTTCTCCT GGTACACGAA GAACGACCTG
TACTCGAAGG AAAAGCTCAC GGGCGACCTC GAGGCGGTGC GCTCGTACTA CCTGAACCGC
GGCTATCTCG AGTTCAACAT CGATTCGACC CAGGTGTCGA TCTCGCCCGA CAAGAAGGAC
ATGTACCTGA CGGTCACGCT GCACGAAGGC GAGCCGTACA CGGTGTCGGG CATCAAGCTG
TCGGGCAACC TGCTCGATCG CGAAGCCGAA CTCAACAAGC TGATCAAGAT CAAGCCGGGT
GATCGCTTCT CGGCCGAAAA GCTGCAACAG ACCACCAAGT CGATCGTCGA CAAGCTCGGT
GAGTACGGTT ACGCATTCGC GACCGTCAAC GCGCAGCCGG ACATCGACCA GGCGAACCAC
AAGGTGAACC TGAACCTCGT CGTCGATCCG AGCCGCCGTG TGTACGTGCG CCGCATCAAC
GTCGTCGGCA ACACGCGTAC GCGCGACGAA GTGGTGCGTC GCGAAATGCG CCAGCTCGAA
AGCTCGTGGT TCGATTCGAA CCGCCTCGCG CTGTCGAAGG ATCGCGTGAA CCGTCTCGGC
TACTTCACCA ACGTCGACGT GACGACGGTG CCGGTCGAAG GTACGAACGA CCAGGTCGAC
GTGAACGTGA AGGTCGATGA AAAGCCGACC GGCGCGATCA CGCTGGGTGC CGGCTTCTCG
TCGACGGACA AGGTCGTGCT GTCGGCCGGC GTGTCGCAGG ACAACGTGTT CGGTTCGGGT
ACCAGCCTGT CGGTGAACGT CAACACCGCG AAGAGCTACC GTACGCTGAC CGTCACGCAG
GTCGACCCGT ACTTCACGGT CGACGGCATC AAGCGGATCA CGGACGTCTA CTACCGCACG
TACCAGCCGC TCTACTATTC GACGAGCTCG AGCTTCCGGA TCATCAGCGC GGGCGGCAAC
CTGAAGTTCG GCATCCCATT CTCGGAAGTC GACACCGTCT ACTTCGGCGC GGGCTTCGAG
CAGAACCGCC TCGACGTCGA TTCGAACACG CCGCAGAGCT ACCAGGATTA CGTGAACCAG
TTCGGCCGCG TGTCGAACAC GGTGCCGCTG ACGATCGCGT GGTCGCGTGA CGCGCGTGAC
AGCGCGCTGA TTCCGAGCCG CGGCTACTTC ACGCAGGCGA ACATGGAGTA CGGCGTGCCG
GTCGGCAAGA TCCAGTACTA CAAGGCCGAC CTGCAGGCCC AGTACTACTA TTCGTTCTCG
CGCGGCTTCA TCCTCGGCAT GAACCTGCAG GGCGGCTACG GTAACGGTAT CGGCAACCCG
TACCCGATCT TCAAGAACTA CTACGCGGGC GGTATCGGCT CCGTGCGTGG CTACGAGCCG
AGCTCGCTGG GCCCGCGCGA CACGAAGACG AACGACCCGA TCGGCGGTTC GAAGATGCTC
GTCGGCAACA TCGAACTGAC GTTCCCGCTG CCGGGCACGG GCTACGACCG CACGCTGCGC
GTGTTCACGT TCCTCGACGG CGGTAACGTG TGGGGCAACG CGCCGGGCGG CACGAGTACG
GGCGCCAACG GCCTGCGTTA CGGCTACGGT GTGGGTCTCG CGTGGATCTC GCCGATCGGC
CCGCTGAAGC TGAGCCTCGG CTTCCCGCTG CAGAAGCACG AAGGCGACCA GTACCAGAAA
TTCCAGTTCC AGATCGGGAC GGCGTTCTGA
|
|---|
| Protein sequence | MLFKPHRFVP KTVAAAALAA HGLAAHAAAP FVVQDIKIEG LQRVEAGSVF AYLPIKQGDT
FTDDKASEAI RALYATGFFN DVRIATQGNV VIVQVQERPA IASIDFTGTK EFDKDNLTKA
LRAVGLADGR YYDKALVDKA EQELKRQYLT RGFYAAEVKT TVTPVDANRV SILFAVAEGP
SAKIRQINFI GNKAFKTSTL RDEMQLSTPN WFSWYTKNDL YSKEKLTGDL EAVRSYYLNR
GYLEFNIDST QVSISPDKKD MYLTVTLHEG EPYTVSGIKL SGNLLDREAE LNKLIKIKPG
DRFSAEKLQQ TTKSIVDKLG EYGYAFATVN AQPDIDQANH KVNLNLVVDP SRRVYVRRIN
VVGNTRTRDE VVRREMRQLE SSWFDSNRLA LSKDRVNRLG YFTNVDVTTV PVEGTNDQVD
VNVKVDEKPT GAITLGAGFS STDKVVLSAG VSQDNVFGSG TSLSVNVNTA KSYRTLTVTQ
VDPYFTVDGI KRITDVYYRT YQPLYYSTSS SFRIISAGGN LKFGIPFSEV DTVYFGAGFE
QNRLDVDSNT PQSYQDYVNQ FGRVSNTVPL TIAWSRDARD SALIPSRGYF TQANMEYGVP
VGKIQYYKAD LQAQYYYSFS RGFILGMNLQ GGYGNGIGNP YPIFKNYYAG GIGSVRGYEP
SSLGPRDTKT NDPIGGSKML VGNIELTFPL PGTGYDRTLR VFTFLDGGNV WGNAPGGTST
GANGLRYGYG VGLAWISPIG PLKLSLGFPL QKHEGDQYQK FQFQIGTAF
|
|---|
| |