Gene Bcep18194_A5223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A5223 
SymbolclpX 
ID3750434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp2278218 
End bp2279489 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content61% 
IMG OID637763521 
ProductATP-dependent protease ATP-binding subunit ClpX 
Protein accessionYP_369461 
Protein GI78066692 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1219] ATP-dependent protease Clp, ATPase subunit 
TIGRFAM ID[TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.721141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACA AAAAAGGTTC GAACAGCGAG AAGCTGTTGT ATTGCTCGTT TTGCGGGAAG 
AGCCAGCATG AGGTGAAAAA ACTCATCGCG GGCCCGTCGG TGTTCATCTG CGATGAGTGC
ATCGACCTCT GCAACGAAAT CATTCGCGAC GAGGCGGCTG CCGCCGGCGT CGAGGCCAGC
CTGTCCCGGT CGGATCTCCC GAGCCCGCAG GAAATTCGCG ACATCCTCGA TCAGTACGTG
ATCGGCCAGG AGCGCGCGAA GAAGATCCTC GCGGTGGCCG TGTACAACCA CTACAAGCGC
CTCAAGCATC TCGACAAGAA GGACGACGTC GAGCTGTCGA AGAGCAACAT CCTGCTGATC
GGCCCGACGG GCTCCGGCAA GACGCTGCTC GCGCAGACGC TCGCGCGGTT GCTCAACGTG
CCGTTCGTGA TCGCCGATGC GACGACGCTG ACCGAAGCCG GCTACGTCGG CGAGGACGTC
GAGAACATCA TCCAGAAGCT GTTGCAGAAC TGCAACTACG AGGTCGACAA GGCCCAGCGC
GGGATCGTCT ACATCGACGA AATCGACAAG ATCAGCCGCA AGTCGGACAA CCCGTCGATC
ACGCGCGACG TGTCGGGCGA GGGTGTCCAG CAGGCACTGC TGAAGCTCGT CGAGGGCACG
ATGGCGTCGG TGCCGCCGCA GGGTGGCCGC AAGCATCCGA ACCAGGATTT CATCCAGGTC
GACACGACCA ACATCCTGTT CATCTGCGGC GGTGCATTCG ACGGCCTCGA GAAGGTGATC
ACCGATCGTA CCGAGAAAAC CGGTATCGGC TTCGGCGCGA CGGTCAAGAG CAAGCAGGAA
CGCGACGCGG GCGAAGTGCT GCGCGAAACG GAACCGGAAG ACCTGATCAA ATTCGGTCTG
ATCCCCGAAT TGATCGGCCG CCTGCCGGTG GTCGCGACGC TCGGCAAGCT CGATGAAGCC
GCGCTGATGA AGATCCTGGT CGAGCCGAAG AACGCGCTCG TCAAGCAGTA TCACAAGCTG
TTCGCGATGG AGCGCGTCGA GCTGGAGATC CGGCCGGGCG CACTGCAGGC AGTCGCCCGC
AAGGCGATCC GCCGCAAGAC CGGCGCGCGC GGTTTGCGTT CGATCATCGA ACAGGCCTTG
CTCGACGTGA TGTACGAGCT GCCGACGATG AAAGGGGTCA GCAAAGTCAT CATCGACGAG
AACGTCATCG ATGGAGACGG CAAGCCTTTG CTGATCTACG AGGACACGCC GAAGGTGGCG
GGTTCGAACT GA
 
Protein sequence
MADKKGSNSE KLLYCSFCGK SQHEVKKLIA GPSVFICDEC IDLCNEIIRD EAAAAGVEAS 
LSRSDLPSPQ EIRDILDQYV IGQERAKKIL AVAVYNHYKR LKHLDKKDDV ELSKSNILLI
GPTGSGKTLL AQTLARLLNV PFVIADATTL TEAGYVGEDV ENIIQKLLQN CNYEVDKAQR
GIVYIDEIDK ISRKSDNPSI TRDVSGEGVQ QALLKLVEGT MASVPPQGGR KHPNQDFIQV
DTTNILFICG GAFDGLEKVI TDRTEKTGIG FGATVKSKQE RDAGEVLRET EPEDLIKFGL
IPELIGRLPV VATLGKLDEA ALMKILVEPK NALVKQYHKL FAMERVELEI RPGALQAVAR
KAIRRKTGAR GLRSIIEQAL LDVMYELPTM KGVSKVIIDE NVIDGDGKPL LIYEDTPKVA
GSN