| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5207 |
|---|
| Symbol | |
|---|
| ID | 3750416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 2253668 |
|---|
| End bp | 2255752 |
|---|
| Gene Length | 2085 bp |
|---|
| Protein Length | 694 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637763503 |
|---|
| Product | 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase |
|---|
| Protein accession | YP_369445 |
|---|
| Protein GI | 78066676 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.372543 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTGG ATTACTCGAC TCGCGACGGC GTGGCCGTCC TTACACTCAA CAATCCGCCC
GTCAACGGGC TCGGCCTGTC GACCCGTCAG GGCGTCATGG ACGCGCTCGA TCGCGCCGTG
CAGGACCCGT CGGTCACGGC CATCGTGCTG ACCGGCGCGG GACGCGCATT CTCGGGCGGC
GCCGACATCA CCGAATTCAA TACGCCGAAG GCGTTGCAGG AGCCGACGCT GCACACCGTG
ATTCACGCGG TGGAGGCAAG CGCGAAGCCC GTCGTCGCGG CGCTGCACAG CGTCGTGATG
GGCGGCGGCC TCGAGCTCGC GCTCGGCGCG CACTACCGCG TCGCGGCACC GGGCGCGCAG
GTCGCGCTGC CCGAAGTGAA GCTCGGCCTG CTGCCGGGCG CGGGCGGCAC GCAGCGCCTG
CCGCGTGCGG TGGGGCTCGA AACCGCGCTG AACATGATCG TGTCGGGCGC GCCGGTGCCG
TCGGAGCAGC TCGCGAAGAG CGGGCTGTTC GACGAAATGG CCGACGGCGA CCTGCTCGAC
GCGGCCGTCG CGTTCGCCCG CAAGGTCGGT GCGCAGAAGG GGCCGCATCC GCGCGTGCGC
GATCGCAAGA TCGTCCACGC GAACGCCGCG GGCTTCATCC AGTTCGCGCG CAATTCGGCC
CGGGCCGCCG CACCGAATTT CCCTGCACCG CACAAGTGCA TCGACGCGAT CGAGGCCGGC
GTGCTGCACG GCTTCGACAA GGGCAGCGTT GCCGAGCGCG AGGGTTTCGT CGCGTTGATG
ATGACGCCGG AAAGCCGCGC GCTGCGGCAT GCGTTCTTCG GCGAGCGCGC CGCGAGCAAG
ATTCCCGACG TGCCGGCCGA TACGCCGCTG CGCGAGATTC GCCGCGTCGG CGTGATCGGC
GCGGGCACGA TGGGCGGCGG GATCGCGATG AACTTCGTCA ACGCGGGCCT GCCCGTCACG
CTGCTCGAGA CGAAACAGGA CGCGCTCGAG CGCGGCGTCG CGACGATCCG CAAGAACTAC
GACGCGCAGG TGAAGAAGGG CAAGCTCACG CAGGAGAAGC TCGATGCGCG CATGGCGCTG
ATCACGCCGA CGCTGTCCTA CGACGACCTG AAGGACGCCG ACCTGATCGT CGAGGCCGTG
TTCGAGGAAC TCGGCGTGAA GGAGCAGGTG TTCAAGAAGC TCGACGAAGT CGCGAAGGCG
GGTGCGATCC TCGCGTCGAA CACGTCGACG CTCGATGTCG ACAAGATCGC GGCGTTCACG
AAGCGCCCGC AGGACGTCGT CGGCATGCAC TTCTTCAGCC CGGCGAACGT GATGAAGCTG
CTCGAGGTCG TGCGCGGCGC GCAGACCGCG AAGGACGTGC TCGCCACCGT GATGGCCGTC
GCGAAGAAGA TCCGCAAGAC GGCGGTCGTG TCGGGCGTGT GCGACGGCTT CATCGGCAAC
CGGATGATCG AGCAGTACAT CCGCCAGGCG CTCTTCATGC TCGAGGAAGG CGCGCTGCCC
GCGCAGGTCG ACCGTGCGAT CGAGAAATTC GGTTTCGCGA TGGGCCCGTT CCGGATGAGT
GACCTCGCCG GCAACGACAT CGGCTGGGCG ATCCGCAAGC GCCGCTACAT CGAGCAGCCC
GATCTCCAGT ACTCGAAGAT TGCCGACCAC CTGTGCGAGC AGGGCCGCTT CGGCCAGAAG
ACGGGCGCCG GCTGGTACGA CTACGTGCCG GGCGATCGCA AGGCGAAGCC GTCGTCGCTC
GTCGACGAGA TGGTCGTCGC GTATTCGAAG GAACGCGGCG TCGAGCGACG CAAGATCGGC
GACGACGAGA TCGTCGAGCG GCTCGTGTTC GCGCTGGCCA ACGAAGGCGC GAAGATCCTC
GAAGAGAAGA TCGCGTCGAA GGCGTCCGAC ATCGACATGG TCTACCTGAC CGGCTATGGC
TTCCCGTTGT GGCGCGGCGG CCCGATGCTG TACGCGGACG CGGTCGGCCT CTACAACGTC
GAGCGCGCGA TTCGCCGCTA CGCGGCGGCA CCGAACGGCG ACGCATGGCA GCTCGCGCCG
TCGATCGCGG AGCTCGCGAA GGCGGGCCGC GGGTTCAACG GCTGA
|
|---|
| Protein sequence | MAVDYSTRDG VAVLTLNNPP VNGLGLSTRQ GVMDALDRAV QDPSVTAIVL TGAGRAFSGG
ADITEFNTPK ALQEPTLHTV IHAVEASAKP VVAALHSVVM GGGLELALGA HYRVAAPGAQ
VALPEVKLGL LPGAGGTQRL PRAVGLETAL NMIVSGAPVP SEQLAKSGLF DEMADGDLLD
AAVAFARKVG AQKGPHPRVR DRKIVHANAA GFIQFARNSA RAAAPNFPAP HKCIDAIEAG
VLHGFDKGSV AEREGFVALM MTPESRALRH AFFGERAASK IPDVPADTPL REIRRVGVIG
AGTMGGGIAM NFVNAGLPVT LLETKQDALE RGVATIRKNY DAQVKKGKLT QEKLDARMAL
ITPTLSYDDL KDADLIVEAV FEELGVKEQV FKKLDEVAKA GAILASNTST LDVDKIAAFT
KRPQDVVGMH FFSPANVMKL LEVVRGAQTA KDVLATVMAV AKKIRKTAVV SGVCDGFIGN
RMIEQYIRQA LFMLEEGALP AQVDRAIEKF GFAMGPFRMS DLAGNDIGWA IRKRRYIEQP
DLQYSKIADH LCEQGRFGQK TGAGWYDYVP GDRKAKPSSL VDEMVVAYSK ERGVERRKIG
DDEIVERLVF ALANEGAKIL EEKIASKASD IDMVYLTGYG FPLWRGGPML YADAVGLYNV
ERAIRRYAAA PNGDAWQLAP SIAELAKAGR GFNG
|
|---|
| |