Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A5130 |
Symbol | rho |
ID | 3750339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | + |
Start bp | 2174154 |
End bp | 2175416 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637763426 |
Product | transcription termination factor Rho |
Protein accession | YP_369368 |
Protein GI | 78066599 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0923516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.603331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTTAT CCGAGCTCAA GTCTCTGCAC GTCTCCGAAC TGATCGAAAT GGCCAATGGC CTGGAGATCG AAAACGCGAA CCGCCTGCGC AAGCAGGAGT TGATGTTTGC CATTCTTAAA AAGCGCGCCA AGACGGGTGA GACGATCTTC GGCGACGGTA CGCTCGAAGT GCTGCCGGAC GGCTTCGGCT TCCTGCGCTC GCCGGAAATG TCGTACCTCG CGAGCACCGA CGACATCTAT ATCAGCCCGT CGCAGATCCG CCGCTTCAAC CTGCACACCG GCGACACCAT CGAAGGTGAA GTCCGCACGC CGAAGGACGG CGAGCGCTAC TTCGCGCTGG TGAAGGTCGA CAAAGTCAAC GGGCAGCCGC CCGAGGCCTC GAAACACAAG ATCATGTTCG AGAACCTCAC GCCGCTGCAC CCGAACAAGC CGCTGTCGCT CGAACGCGAA ATGCGCGGCG AGGAAAACGT CACGGGCCGC ATCATCGACA TGATCGCGCC GATCGGCAAG GGCCAGCGCG GCCTGCTCGT CGCGTCGCCG AAGTCGGGCA AGACCGTGAT GCTCCAGCAC ATCGCACACG CGATCAAGCA GAACCACCCG GACGTGATCC TGTTCGTGCT GCTGATCGAC GAGCGCCCTG AAGAAGTGAC CGAAATGCAG CGCTCGGTCG CCGGCGAAGT GATCGCATCG ACGTTCGACG AACCGGCCAC GCGCCACGTC CAGGTCGCCG AAATGGTGAT CGAGAAGGCC AAGCGCCTCG TCGAAATGAA GCATGACGTC GTGATTCTGC TCGACTCGAT CACACGTCTC GCACGCGCGT ACAACACCGT GATCCCGGCA TCGGGCAAGG TGCTGACGGG TGGTGTCGAC GCAAACGCAC TGCAGCGTCC GAAGCGCTTC TTCGGCGCGG CGCGCAACAT CGAGGAAGGC GGTTCGCTGA CGATCATCGG CACCGCGCTG ATCGAAACCG GCAGCCGCAT GGACGACGTG ATCTACGAAG AGTTCAAGGG CACCGGCAAC ATGGAAGTGC ACCTCGAGCG CCGCCTCGCG GAAAAGCGCG TGTATCCGTC GATCAACCTG AACAAGTCGG GCACGCGTCG CGAAGAAATG CTGATCAAGC CCGAGATCCT TCAGAAGATC TGGGTGCTGC GCAAGTTCAT CCACGACATG GACGAAGTCG AAGCAATGGA ATTCCTGCTC GACAAGATCC GCCAGACGAA GAGCAACTCC GAGTTCTTCG ACCTGATGCG CCGCGGCGGC TAA
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Protein sequence | MHLSELKSLH VSELIEMANG LEIENANRLR KQELMFAILK KRAKTGETIF GDGTLEVLPD GFGFLRSPEM SYLASTDDIY ISPSQIRRFN LHTGDTIEGE VRTPKDGERY FALVKVDKVN GQPPEASKHK IMFENLTPLH PNKPLSLERE MRGEENVTGR IIDMIAPIGK GQRGLLVASP KSGKTVMLQH IAHAIKQNHP DVILFVLLID ERPEEVTEMQ RSVAGEVIAS TFDEPATRHV QVAEMVIEKA KRLVEMKHDV VILLDSITRL ARAYNTVIPA SGKVLTGGVD ANALQRPKRF FGAARNIEEG GSLTIIGTAL IETGSRMDDV IYEEFKGTGN MEVHLERRLA EKRVYPSINL NKSGTRREEM LIKPEILQKI WVLRKFIHDM DEVEAMEFLL DKIRQTKSNS EFFDLMRRGG
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