Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A5118 |
Symbol | rumA |
ID | 3750326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 2161136 |
End bp | 2162533 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637763414 |
Product | 23S rRNA 5-methyluridine methyltransferase |
Protein accession | YP_369356 |
Protein GI | 161702959 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.124268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGAAG CCGTCCCCAC TTCTGCGCGC AAATCAAGAA ATGCGCCCGT CGCGCCCGGG CCCGCCCCGG TTCTCGAGAT CGAATCGCTC GACATGGAAG CGCGCGGTGT CGGTCGCACG ATCACCGAGG ACGGCGAGCC TGGCAAGGTC ATCTTCGTCG AAGGCGCGCT GCCGGGCGAG CGCGTGACCT ATTCGAGCTT CCGCCGCAAG CCAAGCTACG AGCAGGCGAC GGTTGTCGAC ATTCTGCGCC CGAGCGTGAT GCGCACGAAG CCGAAATGCG CGTTCTTCGG CACCTGCGGC GGTTGCTCGA TGCAGCACCT CGACATGCGT GCACAGGTGG CGGTCAAGCA GCGCGTGCTC GAAGACAACC TTTGGCACCT GGCGAAGCTG CGTGCGGAAA CGATGTTCGC GCCGATCCAC GGCCCGTCGT GGGGCTATCG CTACCGCGCG CGCCTGACCG TGCGCAACGT CGCGAAGAAG GGCGGCGTGC TGGTCGGGTT CCACGAGAAG AAGAGCAGCT ACGTCGCCGA CATGACGAGC TGCGAAGTGC TGCCGCCGCA CGTGTCGGCG ATGCTCGTGC CGCTGCGCCG GCTCGTCGAG GGGCTGTCGA TCCGCGATCG GATGCCGCAG ATCGAACTCG CGGTCGGTTC GGAAGTTACG GCGCTCGTGC TGCGCGTGCT GGAGCCGATC AACGCGGACG ACGAAGCGCT GCTGCGCGCG TTCGCTGACG AGCATAAAGT GCAGTTCTGG CTGCAGCCGA AAGGTCCGGA CACGGTGGCG CCGTTCTATC CGCTGGACGT GTCGCTCGAC TACACGCTGC CGGAATTCGG CATCCGCATG CCGTTCAAGC CGACCGACTT CACGCAGGTC AACCACCAGA TCAACCGCGT GCTGGTAGGC CGCGCGCTGC GTCTGCTCGC GCCGTCGCGC GACGACCGCG TGCTCGACCT GTTCTGCGGG ATCGGCAACT TCACGCTGCC GCTCGCGCGG CTGTCGCGCG AGGTGATGGG CATCGAAGGC AGTGACACGC TGACGACGCG CGCGCTGGCG AACGCGCGCG AGAACGGTGT CGACGGCCAC ACGACGTTCG CGTGCCGTAA CCTGTTCGAA GTGACGGGCG ACGACATCCG CGCGCTCGGC GCATTCGACA AGTTCCTGAT CGACCCACCG CGCGAAGGCG CGCTCGCGGT GTCGAAGGCG CTGGCCGAGA TCGCGCAGAG CGGTGAAGGC CCGCTGCCGA AGCGCATCGT CTACGTGTCG TGCAACCCGT CGACGCTCGC GCGCGATGCG GGCCTGCTCG TGCACGAGGC CGGCTACCGC CTGAAGGGCG CCGGTGTCGT GAACATGTTC CCGAATACGT CGCACGTCGA ATCGATCGCA CTGTTCGAGC GCGACTGA
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Protein sequence | MSEAVPTSAR KSRNAPVAPG PAPVLEIESL DMEARGVGRT ITEDGEPGKV IFVEGALPGE RVTYSSFRRK PSYEQATVVD ILRPSVMRTK PKCAFFGTCG GCSMQHLDMR AQVAVKQRVL EDNLWHLAKL RAETMFAPIH GPSWGYRYRA RLTVRNVAKK GGVLVGFHEK KSSYVADMTS CEVLPPHVSA MLVPLRRLVE GLSIRDRMPQ IELAVGSEVT ALVLRVLEPI NADDEALLRA FADEHKVQFW LQPKGPDTVA PFYPLDVSLD YTLPEFGIRM PFKPTDFTQV NHQINRVLVG RALRLLAPSR DDRVLDLFCG IGNFTLPLAR LSREVMGIEG SDTLTTRALA NARENGVDGH TTFACRNLFE VTGDDIRALG AFDKFLIDPP REGALAVSKA LAEIAQSGEG PLPKRIVYVS CNPSTLARDA GLLVHEAGYR LKGAGVVNMF PNTSHVESIA LFERD
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