Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A4954 |
Symbol | |
ID | 3750162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 1976841 |
End bp | 1978058 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637763250 |
Product | major facilitator transporter |
Protein accession | YP_369192 |
Protein GI | 78066423 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.960972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.410728 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGAAA CTTCACCGTC GCTCGAGGCT CGCGATCGTG CTACGAAGCT CACGCAAGGG CTCATTGCGT TATTCGCGTT CAGTTGCGGT GCGATTGTCG CGAACCTGTA CTACGCGCAG CCCATCACCG AACTGATCGC ACCCAGCCTG CACATGTCCA GCGACACGGC GAGTTTCATT GTGTCGCTGA CGCAGATCGG CTACGCATTC GGCCTGTTCT TCATCGTGCC GCTTGGCGAC CTGCTGGAGA ACCGGAAGCT GATGATCACA ACAGCCCTTG TTTCGATTGC GAGCCTTTCA GCGGCGGCGA TCGCCCACAC GCCAGGCCTG TTTCTCATGA TCTCGCTACT GGTCGGCTTT AGTTCGGTGG CGGTACAGAT ACTGATTCCG CTCGCCGCGC ACTTGGCGCC GGATCATTCG CGTGGCCGTG TCGTCGGTAC CATCATGAGC GGGTTGCTGC TCGGCATTCT GCTCGCCCGC CCGCTTTCGA GCGTAGTGGC CGATGCGTTT GGCTGGCGCT TTGTATTCGC AGCGGCTGCC GTGCTGATGA CGCTCGTCAC GGCTTTGCTT GCGCTGACGA TTCCATCGCG CCGGCCTGAT CATCGTTCGA CATACTTCGA GCTGATCGGC TCGCTGCTGC ATCTGGTTCG CACAATGCCC GTGCTGCGTC ATCGTGCGCT CTACCAGGGT CTGATGTTCG CATCGTTCAG CCTGTTTTGG ACCGCGGTCC CGGTCGAGCT CACGCGTCAC TATGGGCTGT CGCAATCGGC AATTGGGCTG TTCGCGCTCG TCGGTGCGAT TGGAGCGACT TCGGCACCGG TTGCGGGTCG CCTAGCGGAT GCAGGCCATA CCGTGCGCGC AACGCTGATT GCGCTGATCG CCGGCACGCT GTCGTACGCA GTGGGCCTAT TCCACGGTAC CGGCCTGTAT GGTCTCGTCG TCACGGGTAT CGTGCTCGAT TTCGCGGTCC AGATGAACAT GGTGCTAGGT CAACGTGAAA TTTATGCACT GCATGCGGCA AGCCGTAATC GCCTGAACGC GCTTTACATG ACCAGCATCT TCGTTGGCGG CGCAGCCGGT TCGGCACTCG CAAGCCCACT ATACGAACAC GGCGGCTGGC CGCTCGTCGC GGCGGTGGCC GCGGCCTTCC CGATTGCCGC ACTTGCGCAC TACCTTGCGA TCGGCCGCCC GCATGCACAG CGTCACGCAC AGACCTGA
|
Protein sequence | MSETSPSLEA RDRATKLTQG LIALFAFSCG AIVANLYYAQ PITELIAPSL HMSSDTASFI VSLTQIGYAF GLFFIVPLGD LLENRKLMIT TALVSIASLS AAAIAHTPGL FLMISLLVGF SSVAVQILIP LAAHLAPDHS RGRVVGTIMS GLLLGILLAR PLSSVVADAF GWRFVFAAAA VLMTLVTALL ALTIPSRRPD HRSTYFELIG SLLHLVRTMP VLRHRALYQG LMFASFSLFW TAVPVELTRH YGLSQSAIGL FALVGAIGAT SAPVAGRLAD AGHTVRATLI ALIAGTLSYA VGLFHGTGLY GLVVTGIVLD FAVQMNMVLG QREIYALHAA SRNRLNALYM TSIFVGGAAG SALASPLYEH GGWPLVAAVA AAFPIAALAH YLAIGRPHAQ RHAQT
|
| |