Gene Bcep18194_A4954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A4954 
Symbol 
ID3750162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp1976841 
End bp1978058 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content61% 
IMG OID637763250 
Productmajor facilitator transporter 
Protein accessionYP_369192 
Protein GI78066423 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.960972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.410728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAA CTTCACCGTC GCTCGAGGCT CGCGATCGTG CTACGAAGCT CACGCAAGGG 
CTCATTGCGT TATTCGCGTT CAGTTGCGGT GCGATTGTCG CGAACCTGTA CTACGCGCAG
CCCATCACCG AACTGATCGC ACCCAGCCTG CACATGTCCA GCGACACGGC GAGTTTCATT
GTGTCGCTGA CGCAGATCGG CTACGCATTC GGCCTGTTCT TCATCGTGCC GCTTGGCGAC
CTGCTGGAGA ACCGGAAGCT GATGATCACA ACAGCCCTTG TTTCGATTGC GAGCCTTTCA
GCGGCGGCGA TCGCCCACAC GCCAGGCCTG TTTCTCATGA TCTCGCTACT GGTCGGCTTT
AGTTCGGTGG CGGTACAGAT ACTGATTCCG CTCGCCGCGC ACTTGGCGCC GGATCATTCG
CGTGGCCGTG TCGTCGGTAC CATCATGAGC GGGTTGCTGC TCGGCATTCT GCTCGCCCGC
CCGCTTTCGA GCGTAGTGGC CGATGCGTTT GGCTGGCGCT TTGTATTCGC AGCGGCTGCC
GTGCTGATGA CGCTCGTCAC GGCTTTGCTT GCGCTGACGA TTCCATCGCG CCGGCCTGAT
CATCGTTCGA CATACTTCGA GCTGATCGGC TCGCTGCTGC ATCTGGTTCG CACAATGCCC
GTGCTGCGTC ATCGTGCGCT CTACCAGGGT CTGATGTTCG CATCGTTCAG CCTGTTTTGG
ACCGCGGTCC CGGTCGAGCT CACGCGTCAC TATGGGCTGT CGCAATCGGC AATTGGGCTG
TTCGCGCTCG TCGGTGCGAT TGGAGCGACT TCGGCACCGG TTGCGGGTCG CCTAGCGGAT
GCAGGCCATA CCGTGCGCGC AACGCTGATT GCGCTGATCG CCGGCACGCT GTCGTACGCA
GTGGGCCTAT TCCACGGTAC CGGCCTGTAT GGTCTCGTCG TCACGGGTAT CGTGCTCGAT
TTCGCGGTCC AGATGAACAT GGTGCTAGGT CAACGTGAAA TTTATGCACT GCATGCGGCA
AGCCGTAATC GCCTGAACGC GCTTTACATG ACCAGCATCT TCGTTGGCGG CGCAGCCGGT
TCGGCACTCG CAAGCCCACT ATACGAACAC GGCGGCTGGC CGCTCGTCGC GGCGGTGGCC
GCGGCCTTCC CGATTGCCGC ACTTGCGCAC TACCTTGCGA TCGGCCGCCC GCATGCACAG
CGTCACGCAC AGACCTGA
 
Protein sequence
MSETSPSLEA RDRATKLTQG LIALFAFSCG AIVANLYYAQ PITELIAPSL HMSSDTASFI 
VSLTQIGYAF GLFFIVPLGD LLENRKLMIT TALVSIASLS AAAIAHTPGL FLMISLLVGF
SSVAVQILIP LAAHLAPDHS RGRVVGTIMS GLLLGILLAR PLSSVVADAF GWRFVFAAAA
VLMTLVTALL ALTIPSRRPD HRSTYFELIG SLLHLVRTMP VLRHRALYQG LMFASFSLFW
TAVPVELTRH YGLSQSAIGL FALVGAIGAT SAPVAGRLAD AGHTVRATLI ALIAGTLSYA
VGLFHGTGLY GLVVTGIVLD FAVQMNMVLG QREIYALHAA SRNRLNALYM TSIFVGGAAG
SALASPLYEH GGWPLVAAVA AAFPIAALAH YLAIGRPHAQ RHAQT