| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4848 |
|---|
| Symbol | |
|---|
| ID | 3750056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 1866450 |
|---|
| End bp | 1867382 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637763145 |
|---|
| Product | ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_369087 |
|---|
| Protein GI | 78066318 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.432693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000811543 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACCG ACAATCATGC CGCCCGCACC TGGCCGCCGA AGCATGACGC GCCCGATGCG
TCCGGTGAGC GGCCCGTCGA CGCGAGGAAA CCGCAGAAGA TGACAAGCAA TCTCGCCGGC
CGCGCCTGGA AGGCGCTCGT GTGGGCGCTG ATGGCGTTCT TCCTGCTGAA CGTGATGCTG
CTGATCGCGA CCGTCGCGGT GAATTCGATC GCGACCCGCT GGTTCGGCAC GCCGCTGCCG
CAGGGCTTCA CGCTGCACTG GTACGCGAAG GCGTGGGAGG ACTTCCAGCT CGCGAGCGTA
CTGTGGGTGA CCGTCGAGGT CGTCGGCGCG GTCGTGCTGC TGTCGATCGC GCTCGGCGTG
CCGGCCGCGT ATGCGCTCGC GCGCGTGCAG TTTCGCGGCA AGCGCTTCGC GCTGCTGGTG
TTCCTGCTGC CGCTGATGGT GCCGCCCGTC ACGTACGGGA TCCCGATGGC CACCGTGATG
TACAAGGTCG GGCTCGCGGG CACGCTGCCC GGCGTGATCC TCGCGAACCT CGTGCCGGCG
CTGCCGTTCG TGATCCTCGT GATGACGCCG TTCATCGAGC AGATCGACCC GAATCTCGAG
TCCGCCGCGC GCATCTTCGG CGCGAACACG TGGCGCTATT TCCGCTACGT GCTGCTGCCG
CTGCTGGTGC CCGGCATGCT CGCGGCGGGG TTGCTCGTGC TGGTGCGCAC GATCGGGATG
TTCGAGCTGA CCTTCTTCAC CGCGGGGCCG AGCACGCAGA CGCTCGTCGT CGCGCTGTAT
TACGCGGTGT TCTCGACCGG CGTGCGCGCG CCGCAGTCGA TCGACGCGAT GGCGATGATC
TACATGGCCA TCACGCTCGT GTGGGTCGTG ATCGCGCTGC AGTTCGTGAG CCCGACGCAA
CTCGTCAGCC GCGTGAAGCA GGAGCGGCAA TAG
|
|---|
| Protein sequence | MATDNHAART WPPKHDAPDA SGERPVDARK PQKMTSNLAG RAWKALVWAL MAFFLLNVML
LIATVAVNSI ATRWFGTPLP QGFTLHWYAK AWEDFQLASV LWVTVEVVGA VVLLSIALGV
PAAYALARVQ FRGKRFALLV FLLPLMVPPV TYGIPMATVM YKVGLAGTLP GVILANLVPA
LPFVILVMTP FIEQIDPNLE SAARIFGANT WRYFRYVLLP LLVPGMLAAG LLVLVRTIGM
FELTFFTAGP STQTLVVALY YAVFSTGVRA PQSIDAMAMI YMAITLVWVV IALQFVSPTQ
LVSRVKQERQ
|
|---|
| |