| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4838 |
|---|
| Symbol | |
|---|
| ID | 3750046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 1853911 |
|---|
| End bp | 1856613 |
|---|
| Gene Length | 2703 bp |
|---|
| Protein Length | 900 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637763135 |
|---|
| Product | ATP-dependent transcription regulator LuxR |
|---|
| Protein accession | YP_369077 |
|---|
| Protein GI | 78066308 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2909] ATP-dependent transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.874018 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.003849 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCACC CACCCGATCG CGCCGACGCG CCTCCCACCG AACTGGTCCT GAAGACGACC
GCACCGCGCG TGCCGGCGCA GTTGCTGGCC CGCGCGCGGC TGAGCCTCGC CGCGCCCGCT
TTCGACGGCC GGCCGGTCAC GCTCGTGCAG GCGCCGGCCG GTTACGGCAA GACGTCGCTG
CTCGCGCAAT GGCGCCGCGA AACCCTTGCG CTCGGCCGTG CGGTCGTGTG GCTGTCGGCC
GACGAGCGCG ACGATGCGGC GCGGTTGCTG CAGGGGCTCG TGCAGGCGGT GCGGACCGGC
TGCGCGCGGC CCGGCTTCGG GCGCCTGATC CCGGTCGGCG CGGCCGACGC GGCGCGTGCG
CTGGAAGGCG TGACCGCATG GCTGGCCGAG GTCGCGCAAC TGTCGATCGA TGCGCTGCTG
ATCGTCGACG ATGCGGAGCG GCTGCCGCCC GCCGGCCTCG ACGCGCTGAC CTACGTGCTG
CACAACGCAC CGCAAAACCT GCATGTCGTC GTCGCCGCGC GGCGCGGGCT CGACCACGTG
GCCGGCGATC TGCTCGCCGG CGGGCAATGC ACGCTCGCCG GCCCCGACGA GCTGCGCTTC
ACGCTCGACG AGACGATCGC GCTGGTCGGC GCGCGCTTTG CGCAGAAAGT CGACGCCGAC
GCGTGCGCGC GGCTGTTCGA GCGCGTCGAC GGCTGGCCGC TCGGCCTGCA GCTCGCGATG
GCCGCGATGG CGCGTTCGGC CGACCCGCGC CAGGCGGTCG ACGCGCTCGC CGCCCGCGTG
GACGGCACGC GCGACCGGCT CGTCGAGCTG CTGCTCACGA ACCTGTCGGC CGACGACACC
GCATTCCTGA CCCGCACGAG CGTTGCCGAT CGCCTGCATC CGTCGCTGTG CGCCGCGCTG
CTCGACGACG CCGACGCGCC CGACCGCCTC GCGCGGCTCG CACGCGACAC GCCGCTGTTC
ATTGCGTCGG ACGATTCGGA CTGGTGCCGG CTGCATCCGC TCGTGCGCGA CACGCTGCGC
GACCGTCTGG CCGCGGGCCC GGAAGCCGAA CGCAGCGCGC TGCATGCGCG TGCGGCCGCC
TGGCTCGACG CGCACGGGAT GACCGAGGAA GCCGCCCGCC ACGCGTATGC GGCCGGCCAG
TTCGAGGTGG CGTACGCGCT CGCGCAGCGC TGCCTCGAGG ATGCGATCAA GCAGGGCCGC
ATCAACGACG TGCTGGACTG GCTCGCGCTG CTGCCCGATG CGGAGCTCGA CAAGCGTCCG
ACGCTACGCG TCGCGGTGGC GTGGGCGCTG GCGCTCGGCG AGCGCCATGT CGAGGCGCAG
CGCCAGATCG CGGGCATCCT CGCGGATCCC GGCACGCCCG CGGCGATGCG CTACGAATGC
GCGCTGATCC TCAGCGCGGC CGCGTATTAC GCCGACGAAA TCGACCGCTT CGTCGAGCTG
TTCGAACCGT GGGCCGACTT CACGCCGCCG GCGGCGACGT GGCTCGCGCA AATGCACGCG
AACCGGCTGT CGGCGCGCGC GATCATCGTC GGCGAACCGG CGCAAGCGCG CCGTTTTCAG
CACGCGGCGC CGCGCGGCGA GACGGCGGCC GGGTTCGGCT ATGTCGCGCG CTGGGGCGAG
CTGATCACGG GCCTGAGCTA CCTGCGCGAG GGCCAGGTCC GGCTGGCCGA CGACGCGCTG
TCGCCGGCGC TCGCGCGTGC GGAAGCCGAT CTCGGGCGCC GCCATCCGCT CACCTGCATG
CTCGCGGCGA TGTGCGCGGC GCTCGCGTAC GAGGCCGACC GCGTCGACCA GGCGGCCGCG
TTGCTCGCAA ACCGGCTCGA CGTACTCGAA CATGCGGGCA CGCCCGATAC CGTGCTGCTC
GGCTATCGCA CCGCCGCGCG CATCGCGCTG CTGCGCGGCG TCGAGCACCG TGCGATCGAC
CTGCTCGAAG CGCTCGACGC GATGGGCGTC GCGCGGCGCC TGCCGCGCCT GTCGGTCGCG
AGTCTCGCCG AACAGGTGCG CATACATGCG GCACGCTATC GCGAGGCGAC CTGCCACGCG
CTCGTCGAGC GGATCGATGC GATCGCCGCA GCCGAGTTTC CGTCGCACGG GCCGCTGTGG
CGGCGGCCCG TCGTGCTACT GCAGGCAACC GCGCACGCCG GCGCGGCGCT GGCCGCGCGC
CGCTGGGATG ACGCAAGCGC CGCGCTTGAC GAAGCCGCGG TGCTGGCCCG CGAAATGAGC
ATGGGGCAGG CACGCATCGA GATCATGGCG CTCAGCGCGT TCGCACTCGA ACAGTCAGGC
GGCGGTGGCC GCGCGCGGCT CGACGAGGCG ATGAACCTCG CCGACCTGTT CGGGCTGATG
CGCACGCTTG CCGACGCGCA TCCGGCCATC GCCGACTGGG CGCGCCGCGC CGGCGACGAG
GCAGCCGCCG GTACCGGCCC CGCGCGGCAC GCGCTGCCGC AGCCACGCAT CGTGCCGCCC
GCCCCGCGCG CCGCGGCCAG CCCGCGCGCG GTGCCGAGCG TCGTGCTGAC GCCGAAGGAG
CGCGCGATTC TCGAATTGCT CGCGCGCAAC CTGTCGAACA AGGAGATCGC GGTGGCGCTC
GCCGTCGGCG AGGAAACCGT GAAGTGGCAC CTGAAGAACC TGTTCGGCAA GCTCGACGCC
AGCTCGCGCA AGCATGCGGT GCGCCGTGCG CTGGTGCTCG GCCTGCTCGA AAGCGCGCCC
TGA
|
|---|
| Protein sequence | MAHPPDRADA PPTELVLKTT APRVPAQLLA RARLSLAAPA FDGRPVTLVQ APAGYGKTSL
LAQWRRETLA LGRAVVWLSA DERDDAARLL QGLVQAVRTG CARPGFGRLI PVGAADAARA
LEGVTAWLAE VAQLSIDALL IVDDAERLPP AGLDALTYVL HNAPQNLHVV VAARRGLDHV
AGDLLAGGQC TLAGPDELRF TLDETIALVG ARFAQKVDAD ACARLFERVD GWPLGLQLAM
AAMARSADPR QAVDALAARV DGTRDRLVEL LLTNLSADDT AFLTRTSVAD RLHPSLCAAL
LDDADAPDRL ARLARDTPLF IASDDSDWCR LHPLVRDTLR DRLAAGPEAE RSALHARAAA
WLDAHGMTEE AARHAYAAGQ FEVAYALAQR CLEDAIKQGR INDVLDWLAL LPDAELDKRP
TLRVAVAWAL ALGERHVEAQ RQIAGILADP GTPAAMRYEC ALILSAAAYY ADEIDRFVEL
FEPWADFTPP AATWLAQMHA NRLSARAIIV GEPAQARRFQ HAAPRGETAA GFGYVARWGE
LITGLSYLRE GQVRLADDAL SPALARAEAD LGRRHPLTCM LAAMCAALAY EADRVDQAAA
LLANRLDVLE HAGTPDTVLL GYRTAARIAL LRGVEHRAID LLEALDAMGV ARRLPRLSVA
SLAEQVRIHA ARYREATCHA LVERIDAIAA AEFPSHGPLW RRPVVLLQAT AHAGAALAAR
RWDDASAALD EAAVLAREMS MGQARIEIMA LSAFALEQSG GGGRARLDEA MNLADLFGLM
RTLADAHPAI ADWARRAGDE AAAGTGPARH ALPQPRIVPP APRAAASPRA VPSVVLTPKE
RAILELLARN LSNKEIAVAL AVGEETVKWH LKNLFGKLDA SSRKHAVRRA LVLGLLESAP
|
|---|
| |