| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4733 |
|---|
| Symbol | |
|---|
| ID | 3749941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 1725000 |
|---|
| End bp | 1725833 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637763030 |
|---|
| Product | ABC efflux pump, inner membrane subunit, NodJ |
|---|
| Protein accession | YP_368972 |
|---|
| Protein GI | 78066203 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.18693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTCC GCAACTATTC CGCCGCCGCA CCGTCGGCAA CACCGCGCGT GTCACGTTTC
GCGATCGCCA TGCCTGCGAA CGCGACCAAC TGGATCGCCG TCTGGCGGCG CAACTATCTC
GTCTGGCGCA AGCTCGCGCT CGCGTCGATG TTCGGCAATC TTGCCGATCC GATGATCTAT
CTGTTCGGGT TGGGGTTCGG GCTCGGGCTG ATGCTCGGCC ATGTCGACGG CGTGTCGTAT
ATCGCGTTCC TCGCGGCCGG CACGGTCGGG TCGAGCGTGA TGATGTCCGC GAGCTTCGAG
TCGATGTATT CGGGATTCTC GCGGATGCAC GTGCAGCGCA CGTGGGAAGC GATCATGCAT
ACGCCGCTCG CGCTCGGCGA CATCGTGCTC GGCGAGATCA TCTGGGGGGC CAGCAAGGCG
ATGCTGTCGG GGGCCGCGAT CATGCTCGTC GCGGGGGCGC TCGGCTATGC GCAGTTTCCG
TCGATGCTCG TGGCGCTGCC CGTGATCGCG CTCGCGGGCC TCGCGTTTGC CAGCATCGCG
ATGATCGTCA CGGCGCTCGC GCCGTCCTAC GATTTCTTCA TGTTTTATCA GACGCTCGTG
CTGACGCCGA TGCTGCTGCT GTCGGGCGTG TTCTTCCCGA TCACGCAGTT GCCGCCGATC
GCGCAGCATG CGGCGCAGGC GCTGCCGCTC GCGAACGCTG TCGAGCTGAT CCGGCCCGCG
ATGCTCGGCC GGCCGGCGAC CGACGTCGCG CTGCATGTCG CGGTGCTCGC CGGCTACGCG
GTCGGCGGCT TCCTGCTGTC CGCATGGCTG TTCCGGCGGC GGATGATGCG CTGA
|
|---|
| Protein sequence | MDVRNYSAAA PSATPRVSRF AIAMPANATN WIAVWRRNYL VWRKLALASM FGNLADPMIY
LFGLGFGLGL MLGHVDGVSY IAFLAAGTVG SSVMMSASFE SMYSGFSRMH VQRTWEAIMH
TPLALGDIVL GEIIWGASKA MLSGAAIMLV AGALGYAQFP SMLVALPVIA LAGLAFASIA
MIVTALAPSY DFFMFYQTLV LTPMLLLSGV FFPITQLPPI AQHAAQALPL ANAVELIRPA
MLGRPATDVA LHVAVLAGYA VGGFLLSAWL FRRRMMR
|
|---|
| |